MirGeneDB 3.0
MirGeneDB ID

Mom-Mir-2-P12f

Family name MIR-2 (all species)
Seed AUCACAG
Species Mossy chiton (Mopalia muscosa)
MiRBase ID
Paralogues Mom-Mir-2-P12g  Mom-Mir-2-P12h  Mom-Mir-2-P12i  Mom-Mir-2-P12j  Mom-Mir-2-P12k  Mom-Mir-2-o85-v1  Mom-Mir-2-o85-v2  Mom-Mir-2-o86  Mom-Mir-2-o88  Mom-Mir-2-o89 
Orthologues Agr-Mir-2-P12f1  Agr-Mir-2-P12f2  Cte-Mir-2-P12  Dgr-Mir-2-P12  Efe-Mir-2-P12f  Esc-Mir-2-P12  Gsp-Mir-2  Hru-Mir-2-P12  Lhy-Mir-2-P12  Llo-Mir-2-P12  Mgi-Mir-2-P12  Npo-Mir-2-P12  Obi-Mir-2-P12  Ofu-Mir-2-P12  Ovu-Mir-2-P12  Pau-Mir-2-P12  Pdu-Mir-2-P12  Ple-Mir-2  Pve-Mir-2-P12  Rph-Mir-2-P12  War-Mir-2-P12 
Node of Origin (locus) Polyplacophora
Node of Origin (family) Protostomia
Genome context
(GCA_031763545.1_ASM3176354v1_genomic_Mom)		 JARFOD010082610.1: 4203-4260 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
ACUGAGAAAUGCUUAUUGGUGAUGAUAACUCUGACGAAGUGGUUGUGGUCUGUGGUUUGUCAUUCAUAUCACAGCUGCUUGGAUCAGUGUUGCUGUAAUCGGUCUCUACGGUAAAUCU
Get precursor sequence
Structure
        10         20        30         40        50        
ACUGAGAAAUGCUUAUU-   G  GA    U    CG-|  UG        C  UGGUU 
                  GGU AU  UAAC CUGA   AAG  GUUGUGGU UG     U
                  CUA UG  GUUG GACU   UUC  CGACACUA AC     G
UCUAAAUGGCAUCUCUGG   A  UC    U    AGG^  GU        U  UUACU 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Is
Star sequence

Mom-Mir-2-P12f_5p* (predicted)
mirBase accessionNone
Sequence 
0- CUGACGAAGUGGUUGUGGUCUG -22
Get sequence
Mature sequence

Mom-Mir-2-P12f_3p (predicted)
mirBase accessionNone
Sequence 
36- UAUCACAGCUGCUUGGAUCAGU -58
Get sequence