MirGeneDB 3.0
MirGeneDB ID

Agr-Mir-2-P12c

Family name MIR-2 (all species)
Seed AUCACAG
Species West Indian fuzzy chiton (Acanthopleura granulata )
MiRBase ID
Paralogues Agr-Mir-2-P12a  Agr-Mir-2-P12b  Agr-Mir-2-P12d  Agr-Mir-2-P12e  Agr-Mir-2-P12f1  Agr-Mir-2-P12f2  Agr-Mir-2-o85  Agr-Mir-2-o86a-v1  Agr-Mir-2-o86a-v2  Agr-Mir-2-o86b  Agr-Mir-2-o87-v1  Agr-Mir-2-o87-v2 
Orthologues Cte-Mir-2-P12  Dgr-Mir-2-P12  Esc-Mir-2-P12  Gsp-Mir-2  Hru-Mir-2-P12  Lgi-Mir-2-P12c  Lhy-Mir-2-P12  Llo-Mir-2-P12  Mgi-Mir-2-P12  Npo-Mir-2-P12  Obi-Mir-2-P12  Ofu-Mir-2-P12  Ovu-Mir-2-P12  Pau-Mir-2-P12  Pdu-Mir-2-P12  Ple-Mir-2  Pve-Mir-2-P12  Rph-Mir-2-P12  War-Mir-2-P12 
Node of Origin (locus) A. granulata
Node of Origin (family) Protostomia
Genome context
(GCA_016165875.1_ASM1616587v1_Acanthopleura_granula)		 JABBOT010000002.1: 46259825-46259884 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UGAACUGAAGUUCGGUCACAACUGCCACACUGACUAAGUGGCUGUGACAAUGUAUCACCUAGCAUCAUAUCACAGCCUGCUUAGAUCAGUAUUGCACCUUGUCAAAGCACAUUCACGCUG
Get precursor sequence
Structure
        10         20         30          40        50        
UGAACUGAAGUUCGGUC-    C-   CAC     -      -|       CAAUGUAUCA 
                  ACAA  UGC   ACUGA CUAAGU GGCUGUGA          C
                  UGUU  ACG   UGACU GAUUCG CCGACACU          C
GUCGCACUUACACGAAAC    CC   UUA     A      U^       AUACUACGAU 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Le
Star sequence

Agr-Mir-2-P12c_5p* (predicted)
mirBase accessionNone
Sequence 
0- UGACUAAGUGGCUGUGACAAU -21
Get sequence
Mature sequence

Agr-Mir-2-P12c_3p
mirBase accessionNone
Sequence 
37- UAUCACAGCCUGCUUAGAUCAGU -60
Get sequence