MirGeneDB 3.0
MirGeneDB ID

Lgi-Mir-2-P12d

Family name MIR-2 (all species)
Seed AUCACAG
Species Owl limpet (Lottia gigantea)
MiRBase ID
Paralogues Lgi-Mir-2-o50  Lgi-Mir-2-P12a  Lgi-Mir-2-P12b  Lgi-Mir-2-P12c  Lgi-Mir-2-P12e 
Orthologues Agr-Mir-2-P12d  Cte-Mir-2-P12  Dgr-Mir-2-P12  Esc-Mir-2-P12  Gsp-Mir-2  Hru-Mir-2-P12  Lhy-Mir-2-P12  Llo-Mir-2-P12  Mgi-Mir-2-P12  Npo-Mir-2-P12  Obi-Mir-2-P12  Ofu-Mir-2-P12  Ovu-Mir-2-P12  Pau-Mir-2-P12  Pdu-Mir-2-P12  Ple-Mir-2  Pve-Mir-2-P12  Rph-Mir-2-P12  War-Mir-2-P12 
Node of Origin (locus) L. gigantea
Node of Origin (family) Protostomia
Genome context
(Lotgi1)		 LOTGIsca_2: 4514607-4514668 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P12d)		 Mir-71 LOTGIsca_2: 4515804-4515862 [-] Ensembl
Mir-2-P12a LOTGIsca_2: 4520083-4520141 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AAAGUUGUUUGUAGAAGGUCAGCUACCCUUCUGACUAAGUGGCUGUGAUAAGUUUAAAAUCAUAGUCUUAUCACAGCCUGCUUAGAUCAGCAUAGAUUCUGACGUACCCUGCUAUUUCUACA
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Structure
        10          20        30         40         50         
AAAGUUGUUUGUAGAAG--     CUACCCUU    -      -|           UUUAAA 
                   GUCAG        CUGA CUAAGU GGCUGUGAUAAG      A
                   CAGUC        GACU GAUUCG CCGACACUAUUC      U
ACAUCUUUAUCGUCCCAUG     UUAGAUAC    A      U^           UGAUAC 
120       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Lgi-Mir-2-P12d_5p* (predicted)
mirBase accessionNone
Sequence 
0- CUGACUAAGUGGCUGUGAUAAG -22
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Mature sequence

Lgi-Mir-2-P12d_3p
mirBase accessionNone
Sequence 
38- UAUCACAGCCUGCUUAGAUCAGCA -62
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