MirGeneDB 3.0
MirGeneDB ID

Lan-Mir-1990-P1

Family name MIR-1990 (all species)
Seed GUAAGUU
Species Lingula (Lingula anatina)
MiRBase ID
Paralogues Lan-Mir-1990-P2 
Orthologues Agr-Mir-1990-P1  Cte-Mir-1990-P1  Eba-Mir-1990-P1  Efe-Mir-1990-o1  Efe-Mir-1990-P1  Ofu-Mir-1990-P1  Pdu-Mir-1990-P1  War-Mir-1990-P1 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Lophotrochozoa
Genome context
(LinAna_1.0)		 LFEI01000037: 549096-549155 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UGUUGCCUUCUACCGACUUUCUUCACAACUUGUAAGUUAACGUAGUCCAAGGUUUAGACUUUGAAACUUGCGAUUGCGAUAACUUGCGGGAUGCGUUGAAAGUGAUCGGCGAGCAAUCCA
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Structure
        10          20        30        40         50         
UGUUGCCUUCUACCGAC--    UUCA  A           A       -|   GUUUAGA 
                   UUUC    CA CUUGUAAGUUA CGUAGUC CAAG       \
                   AAAG    GU GGGCGUUCAAU GCGUUAG GUUC       C
ACCUAACGAGCGGCUAGUG    UUGC  A           A       C^   AAAGUUU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
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Mature sequence

Lan-Mir-1990-P1_5p
mirBase accessionNone
Sequence 
0- UGUAAGUUAACGUAGUCCAAGGUU -24
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Star sequence

Lan-Mir-1990-P1_3p*
mirBase accessionNone
Sequence 
36- CUUGCGAUUGCGAUAACUUGCGGG -60
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