| MirGeneDB ID | Hru-Novel-1 |
|---|---|
| Family name | HRU-NOVEL-1 (all species) |
| Seed | UUUUUAC |
| Species | Red Abalone (Haliotis rufescens) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | |
| Node of Origin (locus) | H. rufescens |
| Node of Origin (family) | H. rufescens |
| Genome context (GCA_023055435.1_xgHalRufe1.0.p_genomic_plus_traces) |
JALGQA010000055.1: 1701472-1701529 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AAGAGAAAGGAAGAUCACGUGACAUCUCCCCUAGGUCACGUGUAAGACGGUAAGAAAUGAUUGGACCUUUUUACAUGUGACUUAGGGAGGCUGUAACGGUACUUCAACACGGAGAAUAGet precursor sequence |
| Structure | 10 20 30 40 50 AAGAGAAAGGAAGAUCA---| G U UC C AAGAAA CGU ACA C CCCUAGGUCACGUGUAAGA GGU \ GCA UGU G GGGAUUCAGUGUACAUUUU CCA U AUAAGAGGCACAACUUCAUG^ A C GA U GGUUAG 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Hru-Novel-1_5p* |
| mirBase accession | None |
| Sequence |
0- CUAGGUCACGUGUAAGACGGU -21
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|
| Mature sequence | Hru-Novel-1_3p |
| mirBase accession | None |
| Sequence |
36- CUUUUUACAUGUGACUUAGGGA -58
Get sequence
|
