MirGeneDB 3.0

MirGeneDB ID

Tur-Mir-22-P2

Family name MIR-22 (all species)
Seed AGCUGCC
Species Two-spotted spider mite (Tetranychus urticae)
MiRBase ID tur-mir-745
Paralogues
Orthologues Aae-Mir-22-P2  Aga-Mir-22-P2  Agr-Mir-22-P2  Asu-Mir-22-P2  Bfl-Mir-22-P2a  Bfl-Mir-22-P2b  Bfl-Mir-22-P2c  Bge-Mir-22-P2  Bla-Mir-22-P2a  Bla-Mir-22-P2b  Bla-Mir-22-P2c  Cbr-Mir-22-P2-v1  Cbr-Mir-22-P2-v2  Cel-Mir-22-P2  Csc-Mir-22-P2  Cte-Mir-22-P2  Dan-Mir-22-P2  Dlo-Mir-22-P2  Dma-Mir-22-P2  Dme-Mir-22-P2  Dmo-Mir-22-P2  Dpu-Mir-22-P2  Dsi-Mir-22-P2  Dya-Mir-22-P2  Eba-Mir-22-P2  Esc-Mir-22-P2  Gpa-Mir-22-P2  Hme-Mir-22-P2  Hru-Mir-22-P2  Isc-Mir-22-P2  Lan-Mir-22-P2  Lgi-Mir-22-P2  Lhy-Mir-22-P2  Llo-Mir-22-P2  Lpo-Mir-22-P2f  Lpo-Mir-22-P2g  Lpo-Mir-22-P2h  Lpo-Mir-22-P2i  Mgi-Mir-22-P2  Mom-Mir-22-P2  Npo-Mir-22-P2  Ofu-Mir-22-P2j  Ofu-Mir-22-P2k  Ovu-Mir-22-P2  Pau-Mir-22-P2  Pca-Mir-22-P2  Pcr-Mir-22-P2l  Pcr-Mir-22-P2m  Pdu-Mir-22-P2  Pfl-Mir-22-P2  Pmi-Mir-22-P2  Pve-Mir-22-P2  Rph-Mir-22-P2  Sko-Mir-22-P2  Snu-Mir-22-P2  Spu-Mir-22-P2  Tca-Mir-22-P2-v1  Tca-Mir-22-P2-v2  War-Mir-22-P2  Xbo-Mir-22-P2d  Xbo-Mir-22-P2e 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCA_000239435.1_ASM23943v1_genomic_TUR_traces)
HE587308.1: 2281016-2281101 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UGGAAUUAUCAAUUUAAUCAAGGAAGGAUUAGUCCGUCUCUGGGCUGCAAGGCUUAAUUGCAAUUUAUUUUGAAUAGCAAUGAAGUUGAAAUGCCAGCUGCCCAGUGAAGGGCUGUUUACUCCUUGAAUCAAUUCAUCGAAGUUAU
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Structure
        10          20        30        40        50        60        70   
UGGAAUUAUCAAUUUAA--|      AG  U      G  U      U  AA   UUAAUUGCAAUUUAUUUUG 
                   UCAAGGA  GA UAGUCC UC CUGGGC GC  GGC                   \
                   AGUUCCU  UU GUCGGG AG GACCCG CG  CCG                   A
UAUUGAAGCUACUUAACUA^      CA  U      A  U      U  A-   UAAAGUUGAAGUAACGAUA 
    140       130       120       110       100         90        80
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
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Star sequence

Tur-Mir-22-P2_5p*

mirBase accessionMIMAT0023048
Sequence
0- AGUCCGUCUCUGGGCUGCAAGGC -23
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Mature sequence

Tur-Mir-22-P2_3p

mirBase accessionMIMAT0023049
Sequence
64- CAGCUGCCCAGUGAAGGGCUGU -86
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