MirGeneDB 3.0

MirGeneDB ID

Aga-Mir-22-P2

Family name MIR-22 (all species)
Seed GGUCGUU
Species African malaria mosquito (Anopheles gambiae)
MiRBase ID aga-mir-980
Paralogues
Orthologues Aae-Mir-22-P2  Agr-Mir-22-P2  Asu-Mir-22-P2  Bfl-Mir-22-P2a  Bfl-Mir-22-P2b  Bfl-Mir-22-P2c  Bge-Mir-22-P2  Bla-Mir-22-P2a  Bla-Mir-22-P2b  Bla-Mir-22-P2c  Cbr-Mir-22-P2-v1  Cbr-Mir-22-P2-v2  Cel-Mir-22-P2  Csc-Mir-22-P2  Cte-Mir-22-P2  Dan-Mir-22-P2  Dlo-Mir-22-P2  Dma-Mir-22-P2  Dme-Mir-22-P2  Dmo-Mir-22-P2  Dpu-Mir-22-P2  Dsi-Mir-22-P2  Dya-Mir-22-P2  Eba-Mir-22-P2  Esc-Mir-22-P2  Gpa-Mir-22-P2  Hme-Mir-22-P2  Hru-Mir-22-P2  Isc-Mir-22-P2  Lan-Mir-22-P2  Lgi-Mir-22-P2  Lhy-Mir-22-P2  Llo-Mir-22-P2  Lpo-Mir-22-P2f  Lpo-Mir-22-P2g  Lpo-Mir-22-P2h  Lpo-Mir-22-P2i  Mgi-Mir-22-P2  Mom-Mir-22-P2  Npo-Mir-22-P2  Ofu-Mir-22-P2j  Ofu-Mir-22-P2k  Ovu-Mir-22-P2  Pau-Mir-22-P2  Pca-Mir-22-P2  Pcr-Mir-22-P2l  Pcr-Mir-22-P2m  Pdu-Mir-22-P2  Pfl-Mir-22-P2  Pmi-Mir-22-P2  Pve-Mir-22-P2  Rph-Mir-22-P2  Sko-Mir-22-P2  Snu-Mir-22-P2  Spu-Mir-22-P2  Tca-Mir-22-P2-v1  Tca-Mir-22-P2-v2  Tur-Mir-22-P2  War-Mir-22-P2  Xbo-Mir-22-P2d  Xbo-Mir-22-P2e 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCF_943734735.2_idAnoGambNW_F1_1_genomic)
NC_064601.1: 21718624-21718685 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CGUGUGUCUAACCGCCUCAAGUUUACAAUUCGGUCGUUCAUUAGGUCAUCUAGCUAAAUUUUACUAAGCUAGCUGCCUAGUGAAGGGCAACAUUGUACUUGAGCUUCACAGAGAAAAAAAGU
Get precursor sequence
Structure
        10            20        30        40        50        60 
CGUGUGUCUAACCGCCU----|    UU     UCG   G         U  U     UAAAUU 
                     CAAGU  ACAAU   GUC UUCAUUAGG CA CUAGC      \
                     GUUCA  UGUUA   CGG AAGUGAUCC GU GAUCG      U
UGAAAAAAAGAGACACUUCGA^    --     CAA   G         -  C     AAUCAU 
120       110       100          90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
Ab Ab He He Mi Mi Ov Ov Ov
Mature sequence

Aga-Mir-22-P2_5p

mirBase accessionMIMAT0041537
Sequence
0- CGGUCGUUCAUUAGGUCAUCUAGC -24
Get sequence
Star sequence

Aga-Mir-22-P2_3p*

mirBase accessionMIMAT0041538
Sequence
39- UAGCUGCCUAGUGAAGGGCAACA -62
Get sequence