Mir-22-P2

MirGeneDB ID

Csc-Mir-22-P2

Family name

MIR-22 (all species)

Seed

GUCCAUC

Species

Arizona bark scorpion (Centruroides sculpturatus)

MiRBase ID

Paralogues

Orthologues

Aae-Mir-22-P2 Aga-Mir-22-P2 Agr-Mir-22-P2 Asu-Mir-22-P2 Bfl-Mir-22-P2a Bfl-Mir-22-P2b Bfl-Mir-22-P2c Bge-Mir-22-P2 Bla-Mir-22-P2a Bla-Mir-22-P2b Bla-Mir-22-P2c Cbr-Mir-22-P2-v1 Cbr-Mir-22-P2-v2 Cel-Mir-22-P2 Cte-Mir-22-P2 Dan-Mir-22-P2 Dlo-Mir-22-P2 Dma-Mir-22-P2 Dme-Mir-22-P2 Dmo-Mir-22-P2 Dpu-Mir-22-P2 Dsi-Mir-22-P2 Dya-Mir-22-P2 Eba-Mir-22-P2 Esc-Mir-22-P2 Gpa-Mir-22-P2 Hme-Mir-22-P2 Hru-Mir-22-P2 Isc-Mir-22-P2 Lan-Mir-22-P2 Lgi-Mir-22-P2 Lhy-Mir-22-P2 Llo-Mir-22-P2 Lpo-Mir-22-P2f Lpo-Mir-22-P2g Lpo-Mir-22-P2h Lpo-Mir-22-P2i Mgi-Mir-22-P2 Mom-Mir-22-P2 Npo-Mir-22-P2 Ofu-Mir-22-P2j Ofu-Mir-22-P2k Ovu-Mir-22-P2 Pau-Mir-22-P2 Pca-Mir-22-P2 Pcr-Mir-22-P2l Pcr-Mir-22-P2m Pdu-Mir-22-P2 Pfl-Mir-22-P2 Pmi-Mir-22-P2 Pve-Mir-22-P2 Rph-Mir-22-P2 Sko-Mir-22-P2 Snu-Mir-22-P2 Spu-Mir-22-P2 Tca-Mir-22-P2-v1 Tca-Mir-22-P2-v2 Tur-Mir-22-P2 War-Mir-22-P2 Xbo-Mir-22-P2d Xbo-Mir-22-P2e

Node of Origin (locus)

Bilateria

Node of Origin (family)

Bilateria

Genome context
(GCF_000671375.1_CSC)

NW_019384373.1: 323358-323414 [+] Ensembl

Precursor
(pre-Mir +30nt flank)

AUCGACGAAGUUGCUGUGUCUCGGCGGUAUAGUCCAUCAUCGGGUUGCUAGCUGUCAUAGGAGGCCAGCUGCCCAGUGAAGGGCUGUUCCACCAGACAGACCUCUUCGAGAGCAGAA

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Structure

        10           20        30        40        50        
AUCGACGAAGUUGCUGU---|   C  C  U       A    C    U   A  UGUCA 
                    GUCU GG GG AUAGUCC UCAU GGGU GCU GC     \
                    CAGA CC CC UGUCGGG AGUG CCCG CGA CG     U
AAGACGAGAGCUUCUCCAGA^   -  A  U       A    A    U   C  GAGGA 
     110       100         90        80        70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UG at 5p(-14), CNNC at 3p(+17), UGUG in loop

Tissue expression

Fe	Fe	Fe	Fe	Ma	Ma	Ma

Mature sequence

Csc-Mir-22-P2_5p

mirBase accession

None

Sequence

0- AGUCCAUCAUCGGGUUGCUAGC -22

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Co-mature sequence

Csc-Mir-22-P2_3p

mirBase accession

None

Sequence

35- CAGCUGCCCAGUGAAGGGCUGU -57

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