Mir-22-P2k

MirGeneDB ID

Ofu-Mir-22-P2k

Family name

MIR-22 (all species)

Seed

AGCUGCC

Species

Tubeworm (Owenia fusiformis)

MiRBase ID

Paralogues

Ofu-Mir-22-P1 Ofu-Mir-22-P2j

Orthologues

Aae-Mir-22-P2 Aga-Mir-22-P2 Agr-Mir-22-P2 Asu-Mir-22-P2 Bge-Mir-22-P2 Cbr-Mir-22-P2-v1 Cbr-Mir-22-P2-v2 Cel-Mir-22-P2 Csc-Mir-22-P2 Cte-Mir-22-P2 Dan-Mir-22-P2 Dlo-Mir-22-P2 Dma-Mir-22-P2 Dme-Mir-22-P2 Dmo-Mir-22-P2 Dpu-Mir-22-P2 Dsi-Mir-22-P2 Dya-Mir-22-P2 Eba-Mir-22-P2 Esc-Mir-22-P2 Gpa-Mir-22-P2 Hme-Mir-22-P2 Hru-Mir-22-P2 Isc-Mir-22-P2 Lan-Mir-22-P2 Lgi-Mir-22-P2 Lhy-Mir-22-P2 Llo-Mir-22-P2 Mgi-Mir-22-P2 Mom-Mir-22-P2 Npo-Mir-22-P2 Ovu-Mir-22-P2 Pau-Mir-22-P2 Pca-Mir-22-P2 Pdu-Mir-22-P2 Pfl-Mir-22-P2 Pmi-Mir-22-P2 Pve-Mir-22-P2 Rph-Mir-22-P2 Sko-Mir-22-P2 Snu-Mir-22-P2 Spu-Mir-22-P2 Tca-Mir-22-P2-v1 Tca-Mir-22-P2-v2 Tur-Mir-22-P2 War-Mir-22-P2

Node of Origin (locus)

O. fusiformis

Node of Origin (family)

Bilateria

Genome context
(GCA_903813345.2_Owenia)

CAIIXF020000012.1: 1297290-1297347 [-]

Precursor
(pre-Mir +30nt flank)

AAAAGAUGUCAUAAAUUGUCAUUGAGGUCUAGUCUUUCAUUUUGCUGCUGUCGUUCAAUAAACCGAGAGCUGCCAAGUGAAGGGCUGAAUCUUUGUGAGGUAACAAUAUUAUGAGGUC

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Structure

        10          20        30        40        50        
AAAAGAUGUCAUAAAUUG--|   U     C             U  U   G  GUUCA 
                    UCAU GAGGU UAGUCUUUCAUUU GC GCU UC     A
                    AGUG UUCUA GUCGGGAAGUGAA CG CGA AG     U
CUGGAGUAUUAUAACAAUGG^   U     A             C  U   G  CCAAA 
      110       100        90        80        70        60

Deep sequencing

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3' NTU

Motifs

UG at 5p(-14)

Tissue expression

To	To

Star sequence

Ofu-Mir-22-P2k_5p*

mirBase accession

None

Sequence

0- AGUCUUUCAUUUUGCUGCUGUC -22

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Mature sequence

Ofu-Mir-22-P2k_3p

mirBase accession

None

Sequence

36- GAGCUGCCAAGUGAAGGGCUGA -58

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