MirGeneDB 3.0

MirGeneDB ID

Ofu-Mir-22-P2j

Family name MIR-22 (all species)
Seed AGCUGCC
Species Tubeworm (Owenia fusiformis)
MiRBase ID
Paralogues Ofu-Mir-22-P1  Ofu-Mir-22-P2k 
Orthologues Aae-Mir-22-P2  Aga-Mir-22-P2  Agr-Mir-22-P2  Asu-Mir-22-P2  Bge-Mir-22-P2  Cbr-Mir-22-P2-v1  Cbr-Mir-22-P2-v2  Cel-Mir-22-P2  Csc-Mir-22-P2  Cte-Mir-22-P2  Dan-Mir-22-P2  Dlo-Mir-22-P2  Dma-Mir-22-P2  Dme-Mir-22-P2  Dmo-Mir-22-P2  Dpu-Mir-22-P2  Dsi-Mir-22-P2  Dya-Mir-22-P2  Eba-Mir-22-P2  Esc-Mir-22-P2  Gpa-Mir-22-P2  Hme-Mir-22-P2  Hru-Mir-22-P2  Isc-Mir-22-P2  Lan-Mir-22-P2  Lgi-Mir-22-P2  Lhy-Mir-22-P2  Llo-Mir-22-P2  Mgi-Mir-22-P2  Mom-Mir-22-P2  Npo-Mir-22-P2  Ovu-Mir-22-P2  Pau-Mir-22-P2  Pca-Mir-22-P2  Pdu-Mir-22-P2  Pfl-Mir-22-P2  Pmi-Mir-22-P2  Pve-Mir-22-P2  Rph-Mir-22-P2  Sko-Mir-22-P2  Snu-Mir-22-P2  Spu-Mir-22-P2  Tca-Mir-22-P2-v1  Tca-Mir-22-P2-v2  Tur-Mir-22-P2  War-Mir-22-P2 
Node of Origin (locus) O. fusiformis
Node of Origin (family) Bilateria
Genome context
(GCA_903813345.2_Owenia)
CAIIXF020000012.1: 1297053-1297111 [-]
Precursor
(pre-Mir +30nt flank)
ACCAGAGCACAGUUACCUUGUAUGCAAUGUAGCUUUCCACGGAGCAGCUAUUCCUUGUUUUAAAUGGGAGCUGCCCAGUGAAGGGCCACAGAGUUACAAGAAUUUUCUUACAUGGGAGU
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Structure
        10           20        30        40         50         
ACCAGAGCACAGUUACC---|    U  AA   A     C   -  A      AUUCCUUGU 
                    UUGUA GC  UGU GCUUU CAC GG GCAGCU         \
                    AACAU UG  ACA CGGGA GUG CC CGUCGA         U
UGAGGGUACAUUCUUUUAAG^    -  AG   C     A   A  -      GGGUAAAUU 
       110       100         90        80         70        60
Deep sequencing
3' NTU No
MotifsNo
Tissue expression
 +
Ow Ow
Star sequence

Ofu-Mir-22-P2j_5p* (predicted)

mirBase accessionNone
Sequence
0- AGCUUUCCACGGAGCAGCUAUU -22
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Mature sequence

Ofu-Mir-22-P2j_3p

mirBase accessionNone
Sequence
37- GAGCUGCCCAGUGAAGGGCCAC -59
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