MirGeneDB 3.0
MirGeneDB ID

Tca-Mir-22-P2-v2

Family name MIR-22 (all species)
Seed GCUCGUC
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-980
Paralogues Tca-Mir-22-P2-v1 
Orthologues Aae-Mir-22-P2  Aga-Mir-22-P2  Agr-Mir-22-P2  Asu-Mir-22-P2  Bfl-Mir-22-P2a  Bfl-Mir-22-P2b  Bfl-Mir-22-P2c  Bge-Mir-22-P2  Bla-Mir-22-P2a  Bla-Mir-22-P2b  Bla-Mir-22-P2c  Cbr-Mir-22-P2-v1  Cbr-Mir-22-P2-v2  Cel-Mir-22-P2  Csc-Mir-22-P2  Cte-Mir-22-P2  Dan-Mir-22-P2  Dlo-Mir-22-P2  Dma-Mir-22-P2  Dme-Mir-22-P2  Dmo-Mir-22-P2  Dpu-Mir-22-P2  Dsi-Mir-22-P2  Dya-Mir-22-P2  Eba-Mir-22-P2  Esc-Mir-22-P2  Gpa-Mir-22-P2  Hme-Mir-22-P2  Hru-Mir-22-P2  Isc-Mir-22-P2  Lan-Mir-22-P2  Lgi-Mir-22-P2  Lhy-Mir-22-P2  Llo-Mir-22-P2  Lpo-Mir-22-P2f  Lpo-Mir-22-P2g  Lpo-Mir-22-P2h  Lpo-Mir-22-P2i  Mgi-Mir-22-P2  Mom-Mir-22-P2  Npo-Mir-22-P2  Ofu-Mir-22-P2j  Ofu-Mir-22-P2k  Ovu-Mir-22-P2  Pau-Mir-22-P2  Pca-Mir-22-P2  Pcr-Mir-22-P2l  Pcr-Mir-22-P2m  Pdu-Mir-22-P2  Pfl-Mir-22-P2  Pmi-Mir-22-P2  Pve-Mir-22-P2  Rph-Mir-22-P2  Sko-Mir-22-P2  Snu-Mir-22-P2  Spu-Mir-22-P2  Tur-Mir-22-P2  War-Mir-22-P2  Xbo-Mir-22-P2d  Xbo-Mir-22-P2e 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Tcas5.2)		 KQ972119: 1429-1486 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-22-P2-v2)		 Mir-22-P2-v1 KQ972119: 1428-1488 [+] Ensembl
Mir-22-P2-v2 KQ972119: 1429-1486 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GGUGGUUUUUUUGACAACUGGGUGCCGCAGGGCUCGUCAUGGGGUAGCUAGCGUGUGAUUAACAGCCAGCUGCCUUUUGAAGGGCUAUAUGGCAUUGGUUUUUUACUUCAAGUGUGUU
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Structure
        10        20          30        40        50        
GGUGGUUUUUUUGACAACUG--|      CAG     G   UG        A  GUGUG 
                      GGUGCCG   GGCUC UCA  GGGUAGCU GC     A
                      UUACGGU   UCGGG AGU  UCCGUCGA CG     U
UUGUGUGAACUUCAUUUUUUGG^      AUA     A   UU        C  ACAAU 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Mature sequence

Tca-Mir-22-P2-v2_5p
mirBase accessionMIMAT0018864
Sequence 
0- GGCUCGUCAUGGGGUAGCUAGC -22
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Star sequence

Tca-Mir-22-P2-v2_3p*
mirBase accessionMIMAT0018865
Sequence 
36- CAGCUGCCUUUUGAAGGGCUAU -58
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