Mir-22-P2

MirGeneDB ID

Gpa-Mir-22-P2

Family name

MIR-22 (all species)

Seed

AGCUGCC

Species

Tsetse fly (Glossina pallidipes)

MiRBase ID

Paralogues

Orthologues

Aae-Mir-22-P2 Aga-Mir-22-P2 Agr-Mir-22-P2 Asu-Mir-22-P2 Bfl-Mir-22-P2a Bfl-Mir-22-P2b Bfl-Mir-22-P2c Bge-Mir-22-P2 Bla-Mir-22-P2a Bla-Mir-22-P2b Bla-Mir-22-P2c Cbr-Mir-22-P2-v1 Cbr-Mir-22-P2-v2 Cel-Mir-22-P2 Csc-Mir-22-P2 Cte-Mir-22-P2 Dan-Mir-22-P2 Dlo-Mir-22-P2 Dma-Mir-22-P2 Dme-Mir-22-P2 Dmo-Mir-22-P2 Dpu-Mir-22-P2 Dsi-Mir-22-P2 Dya-Mir-22-P2 Eba-Mir-22-P2 Esc-Mir-22-P2 Hme-Mir-22-P2 Hru-Mir-22-P2 Isc-Mir-22-P2 Lan-Mir-22-P2 Lgi-Mir-22-P2 Lhy-Mir-22-P2 Llo-Mir-22-P2 Lpo-Mir-22-P2f Lpo-Mir-22-P2g Lpo-Mir-22-P2h Lpo-Mir-22-P2i Mgi-Mir-22-P2 Mom-Mir-22-P2 Npo-Mir-22-P2 Ofu-Mir-22-P2j Ofu-Mir-22-P2k Ovu-Mir-22-P2 Pau-Mir-22-P2 Pca-Mir-22-P2 Pcr-Mir-22-P2l Pcr-Mir-22-P2m Pdu-Mir-22-P2 Pfl-Mir-22-P2 Pmi-Mir-22-P2 Pve-Mir-22-P2 Rph-Mir-22-P2 Sko-Mir-22-P2 Snu-Mir-22-P2 Spu-Mir-22-P2 Tca-Mir-22-P2-v1 Tca-Mir-22-P2-v2 Tur-Mir-22-P2 War-Mir-22-P2 Xbo-Mir-22-P2d Xbo-Mir-22-P2e

Node of Origin (locus)

Bilateria

Node of Origin (family)

Bilateria

Genome context
(GpalI1)

Scaffold338: 26389-26451 [+] Ensembl

Precursor
(pre-Mir +30nt flank)

UGUGGAAAAUUGAAAGAAAAAGAUUACAAGACAGUCCUUCAAUUGGCAAUUUAGCUGUUUUUUUAUUGUUAGCUGCCUUCUGAAGGGCUUCCUUGUAAUUUCCAAGCAACUCUAAAUAACAAG

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Structure

        10        20          30        40        50        60 
UGUGGAAAAUUGAAAGAAAA--|         AC         AUU    AU     UGUUU 
                      AGAUUACAAG  AGUCCUUCA   GGCA  UUAGC     U
                      UUUAAUGUUC  UCGGGAAGU   CCGU  GAUUG     U
GAACAAUAAAUCUCAACGAACC^         CU         CUU    C-     UUAUU 
 120       110       100        90        80         70

Deep sequencing

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3' NTU

Motifs

UGUG in loop

Tissue expression

Gl	Gl	Gl	Gl	Gl	Gl	Gl	Gl	Gl	Gl	Gl	Gl	Gl	Gl	Gl	Gl	Gl	Gl	Gl	Gl	Gl

Star sequence

Gpa-Mir-22-P2_5p*

mirBase accession

None

Sequence

0- ACAGUCCUUCAAUUGGCAAUUUAGC -25

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Mature sequence

Gpa-Mir-22-P2_3p

mirBase accession

None

Sequence

39- UAGCUGCCUUCUGAAGGGCUUCCU -63

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