Mir-22-P2

MirGeneDB ID

Snu-Mir-22-P2

Family name

MIR-22 (all species)

Seed

AGCUGCC

Species

Peanut worm (Sipunculus nudus)

MiRBase ID

Paralogues

Snu-Mir-22-P1

Orthologues

Aae-Mir-22-P2 Aga-Mir-22-P2 Agr-Mir-22-P2 Asu-Mir-22-P2 Bfl-Mir-22-P2a Bfl-Mir-22-P2b Bfl-Mir-22-P2c Bge-Mir-22-P2 Bla-Mir-22-P2a Bla-Mir-22-P2b Bla-Mir-22-P2c Cbr-Mir-22-P2-v1 Cbr-Mir-22-P2-v2 Cel-Mir-22-P2 Csc-Mir-22-P2 Cte-Mir-22-P2 Dan-Mir-22-P2 Dlo-Mir-22-P2 Dma-Mir-22-P2 Dme-Mir-22-P2 Dmo-Mir-22-P2 Dpu-Mir-22-P2 Dsi-Mir-22-P2 Dya-Mir-22-P2 Eba-Mir-22-P2 Esc-Mir-22-P2 Gpa-Mir-22-P2 Hme-Mir-22-P2 Hru-Mir-22-P2 Isc-Mir-22-P2 Lan-Mir-22-P2 Lgi-Mir-22-P2 Lhy-Mir-22-P2 Llo-Mir-22-P2 Lpo-Mir-22-P2f Lpo-Mir-22-P2g Lpo-Mir-22-P2h Lpo-Mir-22-P2i Mgi-Mir-22-P2 Mom-Mir-22-P2 Npo-Mir-22-P2 Ofu-Mir-22-P2j Ofu-Mir-22-P2k Ovu-Mir-22-P2 Pau-Mir-22-P2 Pca-Mir-22-P2 Pcr-Mir-22-P2l Pcr-Mir-22-P2m Pdu-Mir-22-P2 Pfl-Mir-22-P2 Pmi-Mir-22-P2 Pve-Mir-22-P2 Rph-Mir-22-P2 Sko-Mir-22-P2 Spu-Mir-22-P2 Tca-Mir-22-P2-v1 Tca-Mir-22-P2-v2 Tur-Mir-22-P2 War-Mir-22-P2 Xbo-Mir-22-P2d Xbo-Mir-22-P2e

Node of Origin (locus)

Bilateria

Node of Origin (family)

Bilateria

Genome context
(GCA_026874595.1_ASM2687459v1_Sipunculus_nudus)

CM049312.1: 33087010-33087071 [-]

Precursor
(pre-Mir +30nt flank)

UGGUGUUAAUCCAUCAGAGGACGGGCAGAACAGUUCCUUCCCUUGGUUGCAGACCCGUUAAUUUGACAGGGAGCUGCCAAGUGAAGGGCUUUCCUGUCUCCUCAACACAACUGAAACCAAGA

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Structure

        10           20        30        40        50        60  
UGGUGUUAAUCCAUCAG---|   CG     AAC   U     C      U  AGA CCGUUAA 
                    AGGA  GGCAG   AGU CCUUC CUUGGU GC   C       \
                    UCCU  CUGUC   UCG GGAAG GAACCG CG   G       U
AGAACCAAAGUCAACACAAC^   --     CUU   -     U      U  AG- GACAGUU 
120       110       100          90         80         70

Deep sequencing

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3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

To

Star sequence

Snu-Mir-22-P2_5p* (predicted)

mirBase accession

None

Sequence

0- CAGUUCCUUCCCUUGGUUGCAGAC -24

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Mature sequence

Snu-Mir-22-P2_3p

mirBase accession

None

Sequence

40- GAGCUGCCAAGUGAAGGGCUUU -62

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