MirGeneDB 3.0
MirGeneDB ID

Asu-Mir-22-P2

Family name MIR-22 (all species)
Seed AGCUGCC
Species Large roundworm (Ascaris suum)
MiRBase ID asu-mir-1822
Paralogues
Orthologues Aae-Mir-22-P2  Aga-Mir-22-P2  Agr-Mir-22-P2  Bfl-Mir-22-P2a  Bfl-Mir-22-P2b  Bfl-Mir-22-P2c  Bge-Mir-22-P2  Bla-Mir-22-P2a  Bla-Mir-22-P2b  Bla-Mir-22-P2c  Cbr-Mir-22-P2-v1  Cbr-Mir-22-P2-v2  Cel-Mir-22-P2  Csc-Mir-22-P2  Cte-Mir-22-P2  Dan-Mir-22-P2  Dlo-Mir-22-P2  Dma-Mir-22-P2  Dme-Mir-22-P2  Dmo-Mir-22-P2  Dpu-Mir-22-P2  Dsi-Mir-22-P2  Dya-Mir-22-P2  Eba-Mir-22-P2  Esc-Mir-22-P2  Gpa-Mir-22-P2  Hme-Mir-22-P2  Hru-Mir-22-P2  Isc-Mir-22-P2  Lan-Mir-22-P2  Lgi-Mir-22-P2  Lhy-Mir-22-P2  Llo-Mir-22-P2  Lpo-Mir-22-P2f  Lpo-Mir-22-P2g  Lpo-Mir-22-P2h  Lpo-Mir-22-P2i  Mgi-Mir-22-P2  Mom-Mir-22-P2  Npo-Mir-22-P2  Ofu-Mir-22-P2j  Ofu-Mir-22-P2k  Ovu-Mir-22-P2  Pau-Mir-22-P2  Pca-Mir-22-P2  Pcr-Mir-22-P2l  Pcr-Mir-22-P2m  Pdu-Mir-22-P2  Pfl-Mir-22-P2  Pmi-Mir-22-P2  Pve-Mir-22-P2  Rph-Mir-22-P2  Sko-Mir-22-P2  Snu-Mir-22-P2  Spu-Mir-22-P2  Tca-Mir-22-P2-v1  Tca-Mir-22-P2-v2  Tur-Mir-22-P2  War-Mir-22-P2  Xbo-Mir-22-P2d  Xbo-Mir-22-P2e 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(ASU_PRJNA80881_plustraces)		 Scaffold1417: 35061-35121 [-]
Precursor
(pre-Mir +30nt flank)
UUAAAGCUAUACUGCUUGCUUCCUAGCGUACGUCUUUCAUUCGGUUCAGCUAUCGGUGAAUUUCGCUCCGAGCUGCCCUAUGAAGGACUGUCGCUAUUACGCUUUUCCACCCUACUCUAUC
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Structure
        10          20        30         40        50        60  
UUAAAGCUAUACUGCUU--| UUCC     U  -         UC  UU    UA    UGAAU 
                   GC    UAGCG AC GUCUUUCAU  GG  CAGC  UCGG     \
                   CG    AUCGC UG CAGGAAGUA  CC  GUCG  AGCC     U
CUAUCUCAUCCCACCUUUU^ CAUU     -  U         UC  --    --    UCGCU 
 .       110       100         90        80            70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Ce Em Em Em Em Em Em Em Em Em Em La Ov Se Sp Te Zy
Star sequence

Asu-Mir-22-P2_5p*
mirBase accessionMIMAT0021535
Sequence 
0- CGUCUUUCAUUCGGUUCAGCUAUCGG -26
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Mature sequence

Asu-Mir-22-P2_3p
mirBase accessionMIMAT0021536
Sequence 
39- GAGCUGCCCUAUGAAGGACUGU -61
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