MirGeneDB 3.0
MirGeneDB ID

Pdu-Mir-22-P2

Family name MIR-22 (all species)
Seed GUUCCUU
Species Dumerils clam worm (Platynereis dumerilii)
MiRBase ID
Paralogues Pdu-Mir-22-P1 
Orthologues Aae-Mir-22-P2  Aga-Mir-22-P2  Agr-Mir-22-P2  Asu-Mir-22-P2  Bfl-Mir-22-P2a  Bfl-Mir-22-P2b  Bfl-Mir-22-P2c  Bge-Mir-22-P2  Bla-Mir-22-P2a  Bla-Mir-22-P2b  Bla-Mir-22-P2c  Cbr-Mir-22-P2-v1  Cbr-Mir-22-P2-v2  Cel-Mir-22-P2  Csc-Mir-22-P2  Cte-Mir-22-P2  Dan-Mir-22-P2  Dlo-Mir-22-P2  Dma-Mir-22-P2  Dme-Mir-22-P2  Dmo-Mir-22-P2  Dpu-Mir-22-P2  Dsi-Mir-22-P2  Dya-Mir-22-P2  Eba-Mir-22-P2  Esc-Mir-22-P2  Gpa-Mir-22-P2  Hme-Mir-22-P2  Hru-Mir-22-P2  Isc-Mir-22-P2  Lan-Mir-22-P2  Lgi-Mir-22-P2  Lhy-Mir-22-P2  Llo-Mir-22-P2  Lpo-Mir-22-P2f  Lpo-Mir-22-P2g  Lpo-Mir-22-P2h  Lpo-Mir-22-P2i  Mgi-Mir-22-P2  Mom-Mir-22-P2  Npo-Mir-22-P2  Ofu-Mir-22-P2j  Ofu-Mir-22-P2k  Ovu-Mir-22-P2  Pau-Mir-22-P2  Pca-Mir-22-P2  Pcr-Mir-22-P2l  Pcr-Mir-22-P2m  Pfl-Mir-22-P2  Pmi-Mir-22-P2  Pve-Mir-22-P2  Rph-Mir-22-P2  Sko-Mir-22-P2  Snu-Mir-22-P2  Spu-Mir-22-P2  Tca-Mir-22-P2-v1  Tca-Mir-22-P2-v2  Tur-Mir-22-P2  War-Mir-22-P2  Xbo-Mir-22-P2d  Xbo-Mir-22-P2e 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCA_026936325.1_EMBL_pdum_1.0)		 JAPTHN010000002.1: 75489904-75489964 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GGGCCGGACCCACUUGCGGUGCUGUGGUGCAGUUCCUUCUCCUGGCUGCUGUCCCUAUGCUAUGGGCGGGAGCUGCCAAGUGAAGGGCUGUAACCUGGCGCCUUUUUCCACCCUCCCUGCC
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Structure
        10          20         30        40        50        60 
GGGCCGGACCCACUUGC--|      U   -     U     UCC    U  UG    UAUGC 
                   GGUGCUG GGU GCAGU CCUUC   UGGC GC  UCCC     U
                   CCGCGGU CCA UGUCG GGAAG   ACCG CG  AGGG     A
CCGUCCCUCCCACCUUUUU^      -   A     -     UGA    U  --    CGGGU 
 .       110       100         90         80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
24 24 24 24 24 36 36 36 36 36 48 48 48 48 48 6d 6d 6d 6d 72 72 72 72 72
Mature sequence

Pdu-Mir-22-P2_5p
mirBase accessionNone
Sequence 
0- AGUUCCUUCUCCUGGCUGCUGUCCC -25
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Co-mature sequence

Pdu-Mir-22-P2_3p
mirBase accessionNone
Sequence 
39- GAGCUGCCAAGUGAAGGGCUGU -61
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