MirGeneDB 3.0
MirGeneDB ID

Dma-Mir-282-v2

Family name MIR-282 (all species)
Seed AACGUCU
Species Large common water flea (Daphnia magna)
MiRBase ID
Paralogues Dma-Mir-282-v1 
Orthologues Aga-Mir-282  Bge-Mir-282  Dan-Mir-282  Dme-Mir-282  Dmo-Mir-282  Dpu-Mir-282  Dsi-Mir-282  Dya-Mir-282  Gpa-Mir-282  Hme-Mir-282  Tca-Mir-282 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Pancrustacea
Genome context
(DMA_ASM399081)		 NC_046178.1: 847714-847800 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UCCCACAAUACGCAUAACAUAUUUGCUAGGUAGCCUCUCCUAGGCUUUGUCUUGUUGACGUUUGGGUUCUUGGCUUCGGCAAAAGAAAUUCUAGACAACGUCUUGGAGAGCGCUACUUAGCAUAUAUCGAAAGUCAACCGGUACACG
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Structure
        10          20        30         40        50        60        70  
UCCCACAAUACGCAUAAC--    U           -|     U    U     UUGUUGACGUUUGGGUUCUU 
                    AUAU UGCUAGGUAGC CUCUCC AGGC UUGUC                    G
                    UAUA ACGAUUCAUCG GAGAGG UCUG AACAG                    G
GCACAUGGCCAACUGAAAGC    U           C^     U    C     AUCUUAAAGAAAACGGCUUC 
     140       130       120       110       100        90        80
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
01 02 03 04 05 06 07 08 09 10 11 12 13 14
Star sequence

Dma-Mir-282-v2_5p*
mirBase accessionNone
Sequence 
0- UAGCCUCUCCUAGGCUUUGUC -21
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Mature sequence

Dma-Mir-282-v2_3p
mirBase accessionNone
Sequence 
65- CAACGUCUUGGAGAGCGCUACU -87
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