MirGeneDB 3.0
MirGeneDB ID

Tca-Mir-282

Family name MIR-282 (all species)
Seed AGCCUCU
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-282
Paralogues
Orthologues Aae-Mir-282-P1  Aae-Mir-282-P2  Aga-Mir-282  Bge-Mir-282  Dan-Mir-282  Dma-Mir-282-v1  Dma-Mir-282-v2  Dme-Mir-282  Dmo-Mir-282  Dpu-Mir-282  Dsi-Mir-282  Dya-Mir-282  Gpa-Mir-282  Hme-Mir-282 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Pancrustacea
Genome context
(Tcas5.2)		 LG7: 12681808-12681866 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CCCGAUCCAGGACCCACUGAGGUGUAGAGGUAGCCUCUCCUAGGCUUUGUCUGUGAAUUUGGCCGAGACAUAGCCUGAUUGAGGCUAACUUUAGCCUUAGCACCACACUCAUCUCGUUU
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Structure
        10           20        30        40        50         
CCCGAUCCAGGACCCAC---|     G     G       UCC      U     GUGAAU 
                    UGAGGU UAGAG UAGCCUC   UAGGCU UGUCU      \
                    AUUCCG AUUUC AUCGGAG   GUCCGA ACAGA      U
UUUGCUCUACUCACACCACG^     -     A       UUA      U     GCCGGU 
       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Mature sequence

Tca-Mir-282_5p
mirBase accessionMIMAT0008386
Sequence 
0- UAGCCUCUCCUAGGCUUUGUCU -22
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Star sequence

Tca-Mir-282_3p*
mirBase accessionMIMAT0019126
Sequence 
37- ACAUAGCCUGAUUGAGGCUAAC -59
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