MirGeneDB 3.0
MirGeneDB ID

Gpa-Mir-282

Family name MIR-282 (all species)
Seed AGCCUCU
Species Tsetse fly (Glossina pallidipes)
MiRBase ID
Paralogues
Orthologues Aae-Mir-282-P1  Aae-Mir-282-P2  Aga-Mir-282  Bge-Mir-282  Dan-Mir-282  Dma-Mir-282-v1  Dma-Mir-282-v2  Dme-Mir-282  Dmo-Mir-282  Dpu-Mir-282  Dsi-Mir-282  Dya-Mir-282  Hme-Mir-282  Tca-Mir-282 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Pancrustacea
Genome context
(GpalI1)		 Scaffold8: 2954604-2954683 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GAUUGUUUUUGCAACUCCUUACUCUAAGUCUAGCCUCUACUAGGCUUUGUCUGUGUCCACAUGCGAUGUGGAGUUAUUAAAUGUUCAGACAUAGCCUAAAAGAGGUUAGGUGAAGCAGGAAGUAAAUCGACUUAUCAUAA
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Structure
        10         20         30        40        50        60         
GAUUGUUUUUGCAACUC-   A  -| AA           AC      U     GUGUCCACAUGCGAUG 
                  CUU CU CU  GUCUAGCCUCU  UAGGCU UGUCU                U
                  GAA GA GA  UGGAUUGGAGA  AUCCGA ACAGA                G
AAUACUAUUCAGCUAAAU   G  C^ AG           AA      U     CUUGUAAAUUAUUGAG 
.       130       120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl
Mature sequence

Gpa-Mir-282_5p
mirBase accessionNone
Sequence 
0- UAGCCUCUACUAGGCUUUGUCU -22
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Star sequence

Gpa-Mir-282_3p*
mirBase accessionNone
Sequence 
58- ACAUAGCCUAAAAGAGGUUAGG -80
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