MirGeneDB 3.0
MirGeneDB ID

Dme-Mir-282

Family name MIR-282 (all species)
Seed AGCCUCU
Species Fruit fly (Drosophila melanogaster)
MiRBase ID dme-mir-282
Paralogues
Orthologues Aae-Mir-282-P1  Aae-Mir-282-P2  Aga-Mir-282  Bge-Mir-282  Dan-Mir-282  Dma-Mir-282-v1  Dma-Mir-282-v2  Dmo-Mir-282  Dpu-Mir-282  Dsi-Mir-282  Dya-Mir-282  Gpa-Mir-282  Hme-Mir-282  Tca-Mir-282 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Pancrustacea
Genome context
(Drosophila_melanogaster_BDGP6)		 3L: 3251038-3251102 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-282)		 Mir-282 3L: 3251038-3251102 [+] UCSC Ensembl
Mir-955 3L: 3299072-3299134 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGUUCUUUAACUAUAGUUUCCUUCUAAAUCUAGCCUCUACUAGGCUUUGUCUGUGCAUUCGAAAGCCGAUCAGACAUAGCCUAUAAGAGGUUAGGUGUACCAAGGCGAACAAUCAGCGAAAACGG
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Structure
        10         20         30        40        50        60  
CGUUCUUUAACUAUAGUUU-    CUAA-|          AC      U     GUGCAUUCG 
                    CCUU     AUCUAGCCUCU  UAGGCU UGUCU         \
                    GGAA     UGGAUUGGAGA  AUCCGA ACAGA         A
GGCAAAAGCGACUAACAAGC    CCAUG^          AU      U     CUAGCCGAA 
   120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Bo He He La Ov Sa Wh
Mature sequence

Dme-Mir-282_5p
mirBase accessionMIMAT0000346
Sequence 
0- UAGCCUCUACUAGGCUUUGUCU -22
Get sequence
Proposed targets microrna.org: MIMAT0000346
TargetScanFly: dme-miR-282
Star sequence

Dme-Mir-282_3p*
mirBase accessionMIMAT0020809
Sequence 
43- ACAUAGCCUAUAAGAGGUUAGG -65
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