MirGeneDB 3.0
MirGeneDB ID

Dlo-Mir-2-P1-v2

Family name MIR-2 (all species)
Seed CACAGCC
Species Braconid wasp (Diachasmimorpha longicaudata)
MiRBase ID
Paralogues Dlo-Mir-2-P1-v1  Dlo-Mir-2-P2a  Dlo-Mir-2-P2b  Dlo-Mir-2-P3-v1  Dlo-Mir-2-P3-v2  Dlo-Mir-2-P5  Dlo-Mir-2-P7 
Orthologues Aae-Mir-2-P1-v1  Aae-Mir-2-P1-v2  Aga-Mir-2-P1-v1  Aga-Mir-2-P1-v2  Bge-Mir-2-P1-v1  Bge-Mir-2-P1-v2  Csc-Mir-2-P1n  Csc-Mir-2-P1o  Dan-Mir-2-P1-v1  Dan-Mir-2-P1-v2  Dma-Mir-2-P1  Dme-Mir-2-P1-v1  Dme-Mir-2-P1-v2  Dmo-Mir-2-P1  Dpu-Mir-2-P1  Dsi-Mir-2-P1-v1  Dsi-Mir-2-P1-v2  Dya-Mir-2-P1-v1  Dya-Mir-2-P1-v2  Gpa-Mir-2-P1-v1  Gpa-Mir-2-P1-v2  Gsp-Mir-2  Hme-Mir-2-P1-v1  Hme-Mir-2-P1-v2  Isc-Mir-2-P1  Lpo-Mir-2-P1g  Lpo-Mir-2-P1h  Lpo-Mir-2-P1i  Lpo-Mir-2-P1j  Lpo-Mir-2-P1k  Lpo-Mir-2-P1l  Lpo-Mir-2-P1m  Ple-Mir-2  Tca-Mir-2-P1-v1  Tca-Mir-2-P1-v2 
Node of Origin (locus) Arthropoda
Node of Origin (family) Protostomia
Genome context
(GCF_034640455.1_iyDiaLong2_genomic)		 NC_087235.1: 3199844-3199898 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUGGAUGUUGCAGGCGAGGACAUGCUUUUACCAUCAAAGCUGGUUUGUUAUAGAUUUUCGACUAUCACAGCCAGCUUUGAUGAGCAAAAUUGUGUCCAAUGUCAACCAGGGUGUG
Get precursor sequence
Structure
        10         20        30         40        50       
UUGGAUGUUGCAGGCGA-      GC    AC-|             U  U   GAUU 
                  GGACAU  UUUU   CAUCAAAGCUGGUU GU AUA    U
                  CCUGUG  AAAA   GUAGUUUCGACCGA CA UAU    U
GUGUGGGACCAACUGUAA      UU    CGA^             -  C   CAGC 
   110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Sr Sr
Star sequence

Dlo-Mir-2-P1-v2_5p*
mirBase accessionNone
Sequence 
0- CCAUCAAAGCUGGUUUGUUAUA -22
Get sequence
Mature sequence

Dlo-Mir-2-P1-v2_3p
mirBase accessionNone
Sequence 
34- UCACAGCCAGCUUUGAUGAGC -55
Get sequence