MirGeneDB ID | Dlo-Mir-2-P2a |
Family name |
MIR-2 (all species) |
Seed |
CAUCAAA |
Species |
Braconid wasp (Diachasmimorpha longicaudata) |
MiRBase ID |
|
Paralogues |
Dlo-Mir-2-P1-v1
Dlo-Mir-2-P1-v2
Dlo-Mir-2-P2b
Dlo-Mir-2-P3-v1
Dlo-Mir-2-P3-v2
Dlo-Mir-2-P5
Dlo-Mir-2-P7
|
Orthologues |
Aga-Mir-2-P2a
Bge-Mir-2-P2a
Dan-Mir-2-P2a
Dma-Mir-2-o2
Dma-Mir-2-P2
Dme-Mir-2-P2a
Dmo-Mir-2-P2a
Dpu-Mir-2-o2
Dpu-Mir-2-P2
Dsi-Mir-2-P2a
Dya-Mir-2-P2a
Gpa-Mir-2-P2a
Gsp-Mir-2
Hme-Mir-2-P2a
Ple-Mir-2
Tca-Mir-2-P2a
|
Node of Origin (locus) |
Neoptera
|
Node of Origin (family) |
Protostomia
|
Genome context (GCF_034640455.1_iyDiaLong2_genomic) |
NC_087235.1: 3200022-3200076 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AAUUUUUGGAAAUGUUAUUUGCGGUCCGGUACAUCAAAUUGGUUGUGGAAUGUUGUCAGUCAUAUCACAGCCACUUUGAUGAGGUCGGCUCGUAGAAAUUUUCUACAAUUCAUUC
Get precursor sequence
|
Structure | 10 20 30 40 50
AAUUUUUGGAAAUGUUA-- GU UA-| U A UUG
UUUGCG CCGG CAUCAAA UGGUUGUGG AUG U
AGAUGC GGCU GUAGUUU ACCGACACU UAC C
CUUACUUAACAUCUUUUAA UC GGA^ C A UGA
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Dlo-Mir-2-P2a_5p |
mirBase accession | None |
Sequence |
0- ACAUCAAAUUGGUUGUGGAAUG -22
Get sequence
|
Co-mature sequence |
Dlo-Mir-2-P2a_3p |
mirBase accession | None |
Sequence |
32- UAUCACAGCCACUUUGAUGAGGU -55
Get sequence
|