MirGeneDB ID | Dlo-Mir-2-P5 |
Family name |
MIR-2 (all species) |
Seed |
AUCACAG |
Species |
Braconid wasp (Diachasmimorpha longicaudata) |
MiRBase ID |
|
Paralogues |
Dlo-Mir-2-P1-v1
Dlo-Mir-2-P1-v2
Dlo-Mir-2-P2a
Dlo-Mir-2-P2b
Dlo-Mir-2-P3-v1
Dlo-Mir-2-P3-v2
Dlo-Mir-2-P7
|
Orthologues |
Aae-Mir-2-P5a
Aae-Mir-2-P5b
Aga-Mir-2-P5a1
Aga-Mir-2-P5a2
Aga-Mir-2-P5b
Cel-Mir-2-o5
Dan-Mir-2-P5
Dma-Mir-2-P5
Dme-Mir-2-P5
Dmo-Mir-2-P5
Dpu-Mir-2-P5
Dsi-Mir-2-P5
Dya-Mir-2-P5
Gpa-Mir-2-P5-v1
Gpa-Mir-2-P5-v2
Gsp-Mir-2
Ple-Mir-2
Tca-Mir-2-P5c
Tca-Mir-2-P5d
Tca-Mir-2-P5e
|
Node of Origin (locus) |
Pancrustacea
|
Node of Origin (family) |
Protostomia
|
Genome context (GCF_034640455.1_iyDiaLong2_genomic) |
NC_087241.1: 4525982-4526042 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AAAAUUGUUUUCAAACAAUCGUUGGGGUUUCGAAGAACUUGAGCAGUGAUUUGUUAUAUAUAAAUCCAUAUCACAGCACAAGUUACUUCAAACUUUGCGAUUUCAAACAUCGAUACUCUCC
Get precursor sequence
|
Structure | 10 20 30 40 50
AAAAUUGUUUUCAAACA---| U GG C - A A U UUAUAU
AUCG U GGUUU GAAG AACUUG GC GUGAU UG \
UAGC G UCAAA CUUC UUGAAC CG CACUA AC A
CCUCUCAUAGCUACAAACUU^ - UU - A A A U CUAAAU
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Dlo-Mir-2-P5_5p* |
mirBase accession | None |
Sequence |
0- CGAAGAACUUGAGCAGUGAUUUG -23
Get sequence
|
Mature sequence |
Dlo-Mir-2-P5_3p |
mirBase accession | None |
Sequence |
38- UAUCACAGCACAAGUUACUUCAA -61
Get sequence
|