MirGeneDB 3.0
MirGeneDB ID

Csc-Mir-277-P18a

Family name MIR-277 (all species)
Seed AAAUGCA
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-277-P18b 
Orthologues Aae-Mir-277  Aga-Mir-277  Agr-Mir-277  Bge-Mir-277  Bko-Mir-277  Bpl-Mir-277  Cel-Mir-277  Dan-Mir-277  Dlo-Mir-277  Dma-Mir-277  Dme-Mir-277  Dmo-Mir-277  Dpu-Mir-277  Dsi-Mir-277  Dya-Mir-277  Eba-Mir-277  Efe-Mir-277  Esc-Mir-277  Gpa-Mir-277  Gsp-Mir-277  Hme-Mir-277  Hru-Mir-277  Isc-Mir-277  Lgi-Mir-277  Llo-Mir-277  Mgi-Mir-277  Mom-Mir-277  Npo-Mir-277  Obi-Mir-277  Ovu-Mir-277  Pau-Mir-277  Pca-Mir-277  Pcr-Mir-277  Pdu-Mir-277  Pve-Mir-277  Rph-Mir-277  Sne-Mir-277  Snu-Mir-277  Tca-Mir-277  Tur-Mir-277  War-Mir-277 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Protostomia
Genome context
(GCF_000671375.1_CSC)		 NW_019384483.1: 601078-601139 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CUGUUGUCCACUCCUGGUCGCUGGUACUUUCGUUCCAGAGAUGCGUUUACAAGAGUUCUUGUAAUAUCUGUAAAUGCAUUUUCUGGAAUGAAAACUACCCACGACACAUCUUCGACACCUCU
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Structure
        10         20         30         40        50          
CUGUUGUCCACUCCUGG-   CU    C-           -|            AGAGUUCU 
                  UCG  GGUA  UUUCGUUCCAG AGAUGCGUUUACA        \
                  AGC  CCAU  AAAGUAAGGUC UUUACGUAAAUGU        U
UCUCCACAGCUUCUACAC   AC    CA           U^            CUAUAAUG 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma
Star sequence

Csc-Mir-277-P18a_5p*
mirBase accessionNone
Sequence 
0- CGUUCCAGAGAUGCGUUUACA -21
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Mature sequence

Csc-Mir-277-P18a_3p
mirBase accessionNone
Sequence 
40- UAAAUGCAUUUUCUGGAAUGAA -62
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