MirGeneDB 2.1
MirGeneDB ID

Csc-Mir-133-P18

Family name MIR-133 (all species)
Seed UGGUCCC
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-133-P19a  Csc-Mir-133-P19b 
Orthologues Aae-Mir-133  Asu-Mir-133  Bge-Mir-133  Cbr-Mir-133  Cel-Mir-133  Cgi-Mir-133  Cin-Mir-133  Cte-Mir-133  Dan-Mir-133  Dma-Mir-133  Dme-Mir-133  Dmo-Mir-133  Dpu-Mir-133  Dsi-Mir-133  Dya-Mir-133  Efe-Mir-133  Esc-Mir-133  Hme-Mir-133  Isc-Mir-133  Lan-Mir-133  Lgi-Mir-133  Obi-Mir-133  Ovu-Mir-133  Spu-Mir-133  Tca-Mir-133  Xbo-Mir-133 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Bilateria
Genome context
(GCF_000671375.1_CSC)		 NW_019385988.1: 43287-43351 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AAAUUGUGAAGAAGUGCAAUGCUACGCUUUAGCUGGUUGAAUUCGGGCCAAAUUGUUUUCCAUAUAAUAGCAUUUGGUCCCCUUCAACCAGCUGUAGUUGGCAUUUUUCACAACAUCGUAGAAAC
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Structure
        10           20        30        40        50        60  
AAAUUGUGAAGAAGUGC---|      C   U            UUC         UGUUUUCC 
                    AAUGCUA GCU UAGCUGGUUGAA   GGGCCAAAU        A
                    UUACGGU UGA GUCGACCAACUU   CCUGGUUUA        U
CAAAGAUGCUACAACACUUU^      -   U            CC-         CGAUAAUA 
   120       110       100         90         80        70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma
Star sequence

Csc-Mir-133-P18_5p*
mirBase accessionNone
Sequence 
0- AGCUGGUUGAAUUCGGGCCAAAU -23
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Mature sequence

Csc-Mir-133-P18_3p
mirBase accessionNone
Sequence 
43- UUGGUCCCCUUCAACCAGCUGU -65
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