| MirGeneDB ID | Csc-Mir-193-P2v |
|---|
| Family name |
MIR-193 (all species) |
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| Seed |
AAUGCCC |
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| Species |
Arizona bark scorpion (Centruroides sculpturatus) |
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| MiRBase ID |
|
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| Paralogues |
Csc-Mir-193-P1u
|
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| Orthologues |
Bge-Mir-193-P2
Cbr-Mir-193-P2-v1
Cbr-Mir-193-P2-v2
Cel-Mir-193-P2-v1
Cel-Mir-193-P2-v2
Cte-Mir-193-P2
Dgr-Mir-193-P2
Dlo-Mir-193-P2
Ebu-Mir-193-P2
Hme-Mir-193-P2
Hru-Mir-193-P2
Lgi-Mir-193-P2
Llo-Mir-193-P2-v1
Llo-Mir-193-P2-v2
Mgi-Mir-193-P2
Pau-Mir-193-P2
Pdu-Mir-193-P2
Pfl-Mir-193-P2
Pma-Mir-193-P2
Pmi-Mir-193-P2
Pve-Mir-193-P2
Rph-Mir-193-P2
Sko-Mir-193-P2
Snu-Mir-193-P2
Spu-Mir-193-P2
Sro-Mir-193-P2
Tca-Mir-193-P2
Xbo-Mir-193-P2
|
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| Node of Origin (locus) |
C. sculpturatus
|
|---|
| Node of Origin (family) |
Bilateria
|
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Genome context
(GCF_000671375.1_CSC) |
NW_019387724.1: 416-476 [+]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
UAUCACCUUUUAUGGGAGCUGAAGCAGAAAUGGGGUUUCUAAUCGGCAUUUACCAUGACAAAUUUUAUGCAAUGCCCUUGGAAAUCCCAAAUAUGCUCAGCAAUUUCGUCGACCGAAUCUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UAUCACCUUUUAUGGGA---| A GAAA UC UACCAUGAC
GCUGA GCA UGGGGUUUCUAA GGCAUU A
CGACU CGU ACCCUAAAGGUU CCGUAA A
CUCUAAGCCAGCUGCUUUAA^ - AUAA C- CGUAUUUUA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Csc-Mir-193-P2v_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- UGGGGUUUCUAAUCGGCAUUUAC -23
Get sequence
|
|---|
| Mature sequence |
Csc-Mir-193-P2v_3p |
| mirBase accession | None |
|---|
| Sequence |
39- CAAUGCCCUUGGAAAUCCCAAA -61
Get sequence
|
|---|
