| MirGeneDB ID | Csc-Novel-11 |
|---|
| Family name |
CSC-NOVEL-11 (all species) |
|---|
| Seed |
GAAGAUC |
|---|
| Species |
Arizona bark scorpion (Centruroides sculpturatus) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
C. sculpturatus
|
|---|
| Node of Origin (family) |
C. sculpturatus
|
|---|
Genome context
(GCF_000671375.1_CSC) |
NW_019385296.1: 79306-79363 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CCAUUAAUGAUUUUAGAGUCAAUUAUUUUCUGUUUUAUUGGAGCUAUUCAAGCUGUAAAUGUUGUCUGAAGAUCUCUAAUAAUACAGAAAAUGAUAGACCUUAAUGAUUGGAGAAAUG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CCAUUAAUGAUUUUAGA--| A U CUA AGCUGUA
GUC AUUAUUUUCUGU UUAUUGGAG UUCA A
CAG UAGUAAAAGACA AAUAAUCUC AAGU A
GUAAAGAGGUUAGUAAUUC^ A U UAG CUGUUGU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Csc-Novel-11_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- UGUUUUAUUGGAGCUAUUCAAG -22
Get sequence
|
|---|
| Mature sequence |
Csc-Novel-11_3p |
| mirBase accession | None |
|---|
| Sequence |
36- UGAAGAUCUCUAAUAAUACAGA -58
Get sequence
|
|---|
