MirGeneDB 3.0
MirGeneDB ID

Csc-Mir-317-P18

Family name MIR-317 (all species)
Seed GAGUACC
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-317-P17 
Orthologues Aga-Mir-317  Agr-Mir-317  Bge-Mir-317  Cte-Mir-317  Dan-Mir-317  Dlo-Mir-317  Dma-Mir-317  Dme-Mir-317  Dmo-Mir-317  Dpu-Mir-317  Dsi-Mir-317  Dya-Mir-317  Eba-Mir-317  Esc-Mir-317  Gpa-Mir-317  Hme-Mir-317  Hru-Mir-317  Isc-Mir-317  Lgi-Mir-317  Lhy-Mir-317  Llo-Mir-317  Mom-Mir-317  Npo-Mir-317  Obi-Mir-317  Ofu-Mir-317  Ovu-Mir-317  Pau-Mir-317  Pca-Mir-317  Pdu-Mir-317  Pve-Mir-317  Rph-Mir-317  Snu-Mir-317  Tca-Mir-317  Tur-Mir-317  War-Mir-317 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Protostomia
Genome context
(GCF_000671375.1_CSC)		 NW_019384483.1: 602611-602681 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GCGAGAGAUGCGACUGUGCCUGGGUUUAACUGAGUACCACUCUGAGUUCACAUCGGUAGUGUUAAAGAAACGAGUGUGAACACAGCUGGUGGUAUCUCAGUUGGAUCGCGGGUGAAAUCGGCAACUCGUCC
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Structure
        10         20         30         40          50        60   
GCGAGAGAUGCGACUGU-     -            -       --|  A       UCGGUAGUGU 
                  GCCUG GGUUUAACUGAG UACCACU  CUG GUUCACA          U
                  UGGGC CUAGGUUGACUC AUGGUGG  GAC CAAGUGU          A
CCUGCUCAACGGCUAAAG     G            U       UC^  A       GAGCAAAGAA 
 .       120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma
Mature sequence

Csc-Mir-317-P18_5p
mirBase accessionNone
Sequence 
0- UGAGUACCACUCUGAGUUCACA -22
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Star sequence

Csc-Mir-317-P18_3p*
mirBase accessionNone
Sequence 
46- UGAACACAGCUGGUGGUAUCUCAGU -71
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