| MirGeneDB ID | Csc-Mir-317-P18 |
|---|
| Family name |
MIR-317 (all species) |
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| Seed |
GAACACA |
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| Species |
Arizona bark scorpion (Centruroides sculpturatus) |
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| MiRBase ID |
|
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| Paralogues |
Csc-Mir-317-P17
|
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| Orthologues |
Bge-Mir-317
Cte-Mir-317
Dan-Mir-317
Dma-Mir-317
Dme-Mir-317
Dmo-Mir-317
Dpu-Mir-317
Dsi-Mir-317
Dya-Mir-317
Esc-Mir-317
Hme-Mir-317
Isc-Mir-317
Lgi-Mir-317
Npo-Mir-317
Obi-Mir-317
Ovu-Mir-317
Tca-Mir-317
|
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| Node of Origin (locus) |
C. sculpturatus
|
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| Node of Origin (family) |
Protostomia
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Genome context
(GCF_000671375.1_CSC) |
NW_019384483.1: 602611-602681 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GCGAGAGAUGCGACUGUGCCUGGGUUUAACUGAGUACCACUCUGAGUUCACAUCGGUAGUGUUAAAGAAACGAGUGUGAACACAGCUGGUGGUAUCUCAGUUGGAUCGCGGGUGAAAUCGGCAACUCGUCC
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GCGAGAGAUGCGACUGU- - - --| A UCGGUAGUGU
GCCUG GGUUUAACUGAG UACCACU CUG GUUCACA U
UGGGC CUAGGUUGACUC AUGGUGG GAC CAAGUGU A
CCUGCUCAACGGCUAAAG G U UC^ A GAGCAAAGAA
. 120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Csc-Mir-317-P18_5p* |
| mirBase accession | None |
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| Sequence |
0- UGAGUACCACUCUGAGUUCACA -22
Get sequence
|
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| Mature sequence |
Csc-Mir-317-P18_3p |
| mirBase accession | None |
|---|
| Sequence |
46- UGAACACAGCUGGUGGUAUCUCAGU -71
Get sequence
|
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