MirGeneDB 3.0
MirGeneDB ID

Gpa-Mir-317

Family name MIR-317 (all species)
Seed GAACACA
Species Tsetse fly (Glossina pallidipes)
MiRBase ID
Paralogues
Orthologues Aae-Mir-317-P8  Aae-Mir-317-P9  Aga-Mir-317  Agr-Mir-317  Bge-Mir-317  Csc-Mir-317-P17  Csc-Mir-317-P18  Cte-Mir-317  Dan-Mir-317  Dgr-Mir-317-P3  Dgr-Mir-317-P4  Dlo-Mir-317  Dma-Mir-317  Dme-Mir-317  Dmo-Mir-317  Dpu-Mir-317  Dsi-Mir-317  Dya-Mir-317  Eba-Mir-317  Efe-Mir-317-P5  Efe-Mir-317-P6  Efe-Mir-317-P7  Esc-Mir-317  Hme-Mir-317  Hru-Mir-317  Isc-Mir-317  Lan-Mir-317-P10  Lan-Mir-317-P11  Lgi-Mir-317  Lhy-Mir-317  Llo-Mir-317  Lpo-Mir-317-P12  Lpo-Mir-317-P13  Mgi-Mir-317-P1  Mgi-Mir-317-P2  Mom-Mir-317  Npo-Mir-317  Obi-Mir-317  Ofu-Mir-317  Ovu-Mir-317  Pau-Mir-317  Pca-Mir-317  Pdu-Mir-317  Pve-Mir-317  Rph-Mir-317  Snu-Mir-317  Tca-Mir-317  Tur-Mir-317  War-Mir-317 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(GpalI1)		 Scaffold190: 146205-146290 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AAAGCUUUUCAAAAUAAAUGCGCUUACUGCCGGGAUACACCCUGUGCUCGCUUUGAAAUUUUCUAUUAAUAAAAUUUUAUAUGAUAUCAGUGAACACAGCUUGGUGGUAUCUCAGUAGUAGAAGGCAAACAAGUCAUCUUACAUUU
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Structure
        10         20          30         40           50        60        70
AAAGCUUUUCAAAAUAAA-   G  --      C      -    ---|    C     UUGAAAUUUUCUAUUAA 
                   UGC CU  UACUGC GGGAUA CACC   CUGUG UCGCU                 U
                   ACG GA  AUGAUG CUCUAU GUGG   GACAC AGUGA                 A
UUUACAUUCUACUGAACAA   -  AG      A      G    UUC^    A     CUAUAGUAUAUUUUAAA 
    140       130        120       110       100        90        80
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
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Star sequence

Gpa-Mir-317_5p*
mirBase accessionNone
Sequence 
0- CGGGAUACACCCUGUGCUCGCU -22
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Mature sequence

Gpa-Mir-317_3p
mirBase accessionNone
Sequence 
60- UGAACACAGCUUGGUGGUAUCUCAGU -86
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