MirGeneDB 3.0

MirGeneDB ID

Dgr-Mir-317-P3

Family name MIR-317 (all species)
Seed GAACACA
Species Dimorphilus gyrociliatus (Dimorphilus gyrociliatus)
MiRBase ID
Paralogues Dgr-Mir-317-P4 
Orthologues Aga-Mir-317  Agr-Mir-317  Bge-Mir-317  Cte-Mir-317  Dan-Mir-317  Dlo-Mir-317  Dma-Mir-317  Dme-Mir-317  Dmo-Mir-317  Dpu-Mir-317  Dsi-Mir-317  Dya-Mir-317  Eba-Mir-317  Esc-Mir-317  Gpa-Mir-317  Hme-Mir-317  Hru-Mir-317  Isc-Mir-317  Lgi-Mir-317  Lhy-Mir-317  Llo-Mir-317  Mom-Mir-317  Npo-Mir-317  Obi-Mir-317  Ofu-Mir-317  Ovu-Mir-317  Pau-Mir-317  Pca-Mir-317  Pdu-Mir-317  Pve-Mir-317  Rph-Mir-317  Snu-Mir-317  Tca-Mir-317  Tur-Mir-317  War-Mir-317 
Node of Origin (locus) D. gyrociliatus
Node of Origin (family) Protostomia
Genome context
(GCA_904063045.1_Dgyrociliatus)
CAJFCJ010000007.1: 3991609-3991671 [-]
Precursor
(pre-Mir +30nt flank)
CCGUCAUUCGGCGAAGAAGUGGUGAACGGAUGGGAUACCCAGAGGUGUGCACUGUGAGAAAUAUCUAGUGAACACAGCUGGUGGUAUCUCUCUCGUCUACUGCUCACUCAGCUUAAACCUAUC
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Structure
        10          20        30          40        50          
CCGUCAUUCGGCGAAGA--  UG   A    AU       --|   AG    G    GUGAGA 
                   AG  GUG ACGG  GGGAUAC  CCAG  GUGU CACU      \
                   UC  CAU UGCU  CUCUAUG  GGUC  CACA GUGA      A
CUAUCCAAAUUCGACUCAC  GU   C    CU       GU^   GA    A    UCUAUA 
 120       110       100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Star sequence

Dgr-Mir-317-P3_5p* (predicted)

mirBase accessionNone
Sequence
0- UGGGAUACCCAGAGGUGUGCACU -23
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Mature sequence

Dgr-Mir-317-P3_3p (predicted)

mirBase accessionNone
Sequence
38- UGAACACAGCUGGUGGUAUCUCUCU -63
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