MirGeneDB 3.0
MirGeneDB ID

Llo-Mir-317

Family name MIR-317 (all species)
Seed GAACACA
Species Bootlace worm (Lineus longissimus)
MiRBase ID
Paralogues
Orthologues Aae-Mir-317-P8  Aae-Mir-317-P9  Aga-Mir-317  Agr-Mir-317  Bge-Mir-317  Csc-Mir-317-P17  Csc-Mir-317-P18  Cte-Mir-317  Dan-Mir-317  Dgr-Mir-317-P3  Dgr-Mir-317-P4  Dlo-Mir-317  Dma-Mir-317  Dme-Mir-317  Dmo-Mir-317  Dpu-Mir-317  Dsi-Mir-317  Dya-Mir-317  Eba-Mir-317  Efe-Mir-317-P5  Efe-Mir-317-P6  Efe-Mir-317-P7  Esc-Mir-317  Gpa-Mir-317  Hme-Mir-317  Hru-Mir-317  Isc-Mir-317  Lan-Mir-317-P10  Lan-Mir-317-P11  Lgi-Mir-317  Lhy-Mir-317  Lpo-Mir-317-P12  Lpo-Mir-317-P13  Mgi-Mir-317-P1  Mgi-Mir-317-P2  Mom-Mir-317  Npo-Mir-317  Obi-Mir-317  Ofu-Mir-317  Ovu-Mir-317  Pau-Mir-317  Pca-Mir-317  Pdu-Mir-317  Pve-Mir-317  Rph-Mir-317  Snu-Mir-317  Tca-Mir-317  Tur-Mir-317  War-Mir-317 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(GCA_910592395.2_tnLinLong1)		 OU343009.1: 15441595-15441661 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CAAUGACCCAUGAAUAUUCUCCUUUUGGCCAGAGUACCAUUGGGUGUUCCUAUGCUGAUGAUAAGCUGCAUAUGAACACAGCUGGUGGUAUCUCUUUCUAACUGGAGGUCAAACAUCAAGGUCAAUU
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Structure
        10          20        30         40          50        60 
CAAUGACCCAUGAAUAU--     UU    CC    -      UG --|     CUAUGCUGAUG 
                   UCUCC  UUGG  AGAG UACCAU  G  GUGUUC           A
                   GGAGG  AAUC  UCUC AUGGUG  C  CACAAG           U
UUAACUGGAACUACAAACU     UC    UU    U      GU GA^     UAUACGUCGAA 
     120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Sr Sr Sr Sr Sr Sr
Star sequence

Llo-Mir-317_5p*
mirBase accessionNone
Sequence 
0- AGAGUACCAUUGGGUGUUCCUA -22
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Mature sequence

Llo-Mir-317_3p
mirBase accessionNone
Sequence 
42- UGAACACAGCUGGUGGUAUCUCUUU -67
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