MirGeneDB 3.0

MirGeneDB ID

Csc-Mir-153-P19a-v2

Family name MIR-153 (all species)
Seed UCAUUUU
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-153-P18  Csc-Mir-153-P19a-v1  Csc-Mir-153-P19b-v1  Csc-Mir-153-P19b-v2 
Orthologues Agr-Mir-153  Asu-Mir-153  Bfl-Mir-153  Bko-Mir-153  Bla-Mir-153  Bpl-Mir-153  Cin-Mir-153  Cte-Mir-153  Dgr-Mir-153  Dma-Mir-153  Dpu-Mir-153  Eba-Mir-153  Egr-Mir-153  Gsa-Mir-153  Gsp-Mir-153  Hmi-Mir-153  Hru-Mir-153  Isc-Mir-153  Lan-Mir-153  Lgi-Mir-153  Llo-Mir-153  Mgi-Mir-153  Mom-Mir-153  Npo-Mir-153  Obi-Mir-153  Ofu-Mir-153  Ovu-Mir-153  Pau-Mir-153  Pca-Mir-153  Pcr-Mir-153  Pdu-Mir-153  Pfl-Mir-153  Pmi-Mir-153  Pve-Mir-153  Rph-Mir-153  Sko-Mir-153  Sme-Mir-153  Snu-Mir-153  Spu-Mir-153  Tur-Mir-153  War-Mir-153  Xbo-Mir-153 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Bilateria
Genome context
(GCF_000671375.1_CSC)
NW_019385909.1: 125022-125081 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UGAAAAAAAGGCAUUUACCUAAUCAUACUUAUCAUUUUUGUGAUUGGUGCAAUUGUAUUUCAACAAGUUGCAUAGUCAUAAAAAUGAUGGGUGUGUUCUGGUNUUCUAAAUAUAUAUAUA
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Structure
        10          20        30        40        50          
UGAAAAAAAGGCAUUUA--| UAAU                       G       GUAUU 
                   CC    CAUACUUAUCAUUUUUGUGAUUG UGCAAUU     \
                   GG    GUGUGGGUAGUAAAAAUACUGAU ACGUUGA     U
AUAUAUAUAUAAAUCUUNU^ UCUU                       -       ACAAC 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Fe Fe Fe Fe Ma Ma Ma
Mature sequence

Csc-Mir-153-P19a-v2_5p

mirBase accessionNone
Sequence
0- AUCAUUUUUGUGAUUGGUGCAAUU -24
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Star sequence

Csc-Mir-153-P19a-v2_3p*

mirBase accessionNone
Sequence
37- UUGCAUAGUCAUAAAAAUGAUGG -60
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