| MirGeneDB ID | Csc-Novel-10 |
|---|
| Family name |
CSC-NOVEL-10 (all species) |
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| Seed |
GCAAGGG |
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| Species |
Arizona bark scorpion (Centruroides sculpturatus) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. sculpturatus
|
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| Node of Origin (family) |
C. sculpturatus
|
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Genome context
(GCF_000671375.1_CSC) |
NW_019384765.1: 559592-559657 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUAAGUUCUACUCAAACUGAAAUUAUUAAUUGACUUACAAACCACCUUGCACAUGUUUUACAGUUGGAAAAGUGUGCAAGGGGUUUGUAGGUCAAUUAAAUCAAUUUCCAUAAAAACUUUUUCGUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UUAAGUUCUACUCAAACU A--| A UGUUUUACA
GAAAUU UUAAUUGACUUACAAACC CCUUGCACA \
CUUUAA AAUUAACUGGAUGUUUGG GGAACGUGU G
AUGCUUUUUCAAAAAUAC CUA^ - GAAAAGGUU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UGUG in loop |
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Tissue expression
|
|
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| Star sequence |
Csc-Novel-10_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- UGACUUACAAACCACCUUGCACA -23
Get sequence
|
|---|
| Mature sequence |
Csc-Novel-10_3p |
| mirBase accession | None |
|---|
| Sequence |
44- UGCAAGGGGUUUGUAGGUCAAU -66
Get sequence
|
|---|
