Mir-10-P3r1

MirGeneDB ID

Csc-Mir-10-P3r1

Family name

MIR-10 (all species)

Seed

CCCUGAG

Species

Arizona bark scorpion (Centruroides sculpturatus)

MiRBase ID

Paralogues

Csc-Mir-10-P1q1-v1 Csc-Mir-10-P1q1-v2 Csc-Mir-10-P1q2-v1 Csc-Mir-10-P1q2-v2 Csc-Mir-10-P1q3-v1 Csc-Mir-10-P1q3-v2 Csc-Mir-10-P1r Csc-Mir-10-P2r1 Csc-Mir-10-P2r2 Csc-Mir-10-P3r2 Csc-Mir-10-P4q Csc-Mir-10-P4r

Orthologues

Aae-Mir-10-P3 Adi-Mir-10 Aga-Mir-10-P3 Agr-Mir-10-P3 Asp-Mir-10 Asu-Mir-10-P3 Bfl-Mir-10-P3 Bge-Mir-10-P3 Bko-Mir-10-P3 Bla-Mir-10-P3 Bpl-Mir-10-P3 Cin-Mir-10-P3 Cte-Mir-10-P3 Dan-Mir-10-P3 Dlo-Mir-10-P3 Dma-Mir-10-P3 Dme-Mir-10-P3 Dmo-Mir-10-P3 Dpu-Mir-10-P3 Dsi-Mir-10-P3 Dya-Mir-10-P3 Eba-Mir-10-P3 Egr-Mir-10-P3 Esc-Mir-10-P3 Gpa-Mir-10-P3 Gsa-Mir-10-P3 Gsp-Mir-10-P3 Hru-Mir-10-P3 Isc-Mir-10-P3 Lan-Mir-10-P3 Lgi-Mir-10-P3 Lhy-Mir-10-P3 Llo-Mir-10-P3 Mgi-Mir-10-P3 Mom-Mir-10-P3 Nag-Mir-10-P3-v1 Nag-Mir-10-P3-v2 Nve-Mir-10 Obi-Mir-10-P3 Ofu-Mir-10-P3 Ovu-Mir-10-P3 Pau-Mir-10-P3 Pca-Mir-10-P3 Pcr-Mir-10-P3 Pdu-Mir-10-P3 Ple-Mir-10-P3 Pmi-Mir-10-P3 Pve-Mir-10-P3 Rph-Mir-10-P3 Sko-Mir-10-P3 Snu-Mir-10-P3 Spu-Mir-10-P3 Tca-Mir-10-P3 War-Mir-10-P3 Xbo-Mir-10-P3

Node of Origin (locus)

C. sculpturatus

Node of Origin (family)

Eumetazoa

Genome context
(GCF_000671375.1_CSC)

NW_019384344.1: 397903-397958 [+] Ensembl

Precursor
(pre-Mir +30nt flank)

AGUAUUCGACAAGAAUUCCCUGUUCCCCACUCCCUGAGACCCUAACUUGUGAUGCAAUCCUGUCACAGGUUAGUCUCUCAGGUCCUGGGUAGCAGGCGACCUCAUAUUCAUCAGAA

Get precursor sequence

Structure

        10          20        30        40        50       
AGUAUUCGACAAGAAUUC--|     C    CUC       CC           UGCA 
                    CCUGUU CCCA   CCUGAGA  CUAACUUGUGA    A
                    GGACGA GGGU   GGACUCU  GAUUGGACACU    U
AAGACUACUUAUACUCCAGC^     U    CCU       CU           GUCC 
    110       100        90        80        70        60

Deep sequencing

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3' NTU

Motifs

Tissue expression

Fe	Fe	Fe	Fe	Ma	Ma	Ma

Mature sequence

Csc-Mir-10-P3r1_5p

mirBase accession

None

Sequence

0- UCCCUGAGACCCUAACUUGUGA -22

Get sequence

Star sequence

Csc-Mir-10-P3r1_3p*

mirBase accession

None

Sequence

34- ACAGGUUAGUCUCUCAGGUCCU -56

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