MirGeneDB 3.0
MirGeneDB ID

Csc-Mir-71-P15

Family name MIR-71 (all species)
Seed CUCACUA
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-71-P14 
Orthologues Aae-Mir-71  Aga-Mir-71  Agr-Mir-71  Asu-Mir-71  Bfl-Mir-71  Bge-Mir-71  Bla-Mir-71  Cbr-Mir-71  Cel-Mir-71  Cte-Mir-71  Dgr-Mir-71  Dlo-Mir-71  Dma-Mir-71  Dpu-Mir-71  Egr-Mir-71  Esc-Mir-71  Hme-Mir-71  Hru-Mir-71  Isc-Mir-71  Lgi-Mir-71  Lhy-Mir-71  Llo-Mir-71  Mgi-Mir-71  Mom-Mir-71  Npo-Mir-71  Obi-Mir-71  Ofu-Mir-71  Ovu-Mir-71  Pau-Mir-71  Pca-Mir-71  Pdu-Mir-71  Pfl-Mir-71  Ple-Mir-71  Pmi-Mir-71  Pve-Mir-71  Rph-Mir-71  Sko-Mir-71  Snu-Mir-71  Spu-Mir-71  Tca-Mir-71  War-Mir-71 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Nephrozoa
Genome context
(GCF_000671375.1_CSC)		 NW_019384652.1: 448162-448221 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CUUGGAAUGAUAUAACUGGUAUUAGUUCUGUGAAAGACAUGGGUAGUGAGAUGUGAUUUUUAAAAUCAUCUCACUACCUUGUCUUUGACGGAAAUAAUACAUUUUUGCAUCUUAAAUUUG
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Structure
        10          20        30        40        50          
CUUGGAAUGAUAUAACUG--|     G      G       U             UGAUUU 
                    GUAUUA UUCUGU AAAGACA GGGUAGUGAGAUG      \
                    CAUAAU AAGGCA UUUCUGU UCCAUCACUCUAC      U
GUUUAAAUUCUACGUUUUUA^     A      G       -             UAAAAU 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma
Star sequence

Csc-Mir-71-P15_5p*
mirBase accessionNone
Sequence 
0- UGAAAGACAUGGGUAGUGAGAUG -23
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Mature sequence

Csc-Mir-71-P15_3p
mirBase accessionNone
Sequence 
38- UCUCACUACCUUGUCUUUGACG -60
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