MirGeneDB 2.1
MirGeneDB ID

Spu-Mir-71

Family name MIR-71 (all species)
Seed GAAAGAC
Species Purple sea urchin (Strongylocentrotus purpuratus)
MiRBase ID spu-mir-71
Paralogues
Orthologues Aae-Mir-71  Asu-Mir-71  Bfl-Mir-71  Bge-Mir-71  Bla-Mir-71  Cbr-Mir-71  Cel-Mir-71  Cgi-Mir-71  Csc-Mir-71-P14  Csc-Mir-71-P15  Cte-Mir-71  Dma-Mir-71  Dpu-Mir-71  Efe-Mir-71-P1  Efe-Mir-71-P2  Efe-Mir-71-P3  Esc-Mir-71  Hme-Mir-71  Isc-Mir-71  Lan-Mir-71-P4  Lan-Mir-71-P5  Lgi-Mir-71  Lpo-Mir-71-P7  Lpo-Mir-71-P8  Lpo-Mir-71-P9  Lpo-Mir-71-P10  Lpo-Mir-71-P11  Lpo-Mir-71-P12  Lpo-Mir-71-P13  Npo-Mir-71  Obi-Mir-71  Ovu-Mir-71  Pfl-Mir-71  Pmi-Mir-71  Sko-Mir-71  Sme-Mir-71-P16a  Sme-Mir-71-P16b  Sme-Mir-71-P17  Sme-Mir-71-P18  Sme-Mir-71-P19  Tca-Mir-71 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Spur_5.0)		 AAGJ06000008.1: 10606961-10607022 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUACAAUUCACAGAAUCGGUGUUCCCUGAGUGAAAGACAUGGGUAGUGAGAUUUGACUAUCACAAAACAAUCUCACUAUUCUGUUUUUCCCCUGGUGGAUACUUAUUACAUCUACUACCUGC
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Structure
        10          20         30        40        50        60 
UUACAAUUCACAGAAUC--       -| UGAGU        U             UGACUAU 
                   GGUGUUC CC     GAAAGACA GGGUAGUGAGAUU       \
                   UCAUAGG GG     CUUUUUGU CUUAUCACUCUAA       C
CGUCCAUCAUCUACAUUAU       U^ UCCC-        -             CAAAACA 
120       110       100        90          80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
32 Bl Eg Ga Ov Pl To To
Mature sequence

Spu-Mir-71_5p
mirBase accessionMIMAT0009660
Sequence 
0- UGAAAGACAUGGGUAGUGAGAUU -23
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Star sequence

Spu-Mir-71_3p*
mirBase accessionNone
Sequence 
40- UCUCACUAUUCUGUUUUUCCCC -62
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