MirGeneDB 3.0
59 Strongylocentrotus purpuratus microRNA genes
Sort by genome coordinates Motifs Tissue expression
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MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC 32 Bl Eg Ga Ov Pl To To
Spu-Let-7 spu-let-7 LET-7 GAGGUAG MIMAT0009649 None AAGJ06000001.1 27043769 27043836 + Bilateria Bilateria Unknown 1
Spu-Mir-1 spu-mir-1 MIR-1 GGAAUGU None MIMAT0009650 AAGJ06000013.1 7279918 7279981 + Bilateria Bilateria No 1
Spu-Mir-7 spu-mir-7 MIR-7 GGAAGAC MIMAT0009651 None AAGJ06000009.1 11221 11286 - Bilateria Bilateria No 1 1
Spu-Mir-8 spu-mir-200 MIR-8 AAUACUG MIMAT0013801 MIMAT0009652 AAGJ06000016.1 26494529 26494591 - Nephrozoa Nephrozoa No 1
Spu-Mir-9 spu-mir-9 MIR-9 CUUUGGU MIMAT0009653 MIMAT0009661 AAGJ06000009.1 10964608 10964669 + Bilateria Bilateria No 1 1
Spu-Mir-10-P1 spu-mir-10 MIR-10 ACCCUGU MIMAT0009654 None AAGJ06000006.1 38277848 38277918 + Bilateria Eumetazoa No 1
Spu-Mir-10-P2m spu-mir-2003 MIR-10 ACCCGUA MIMAT0009744 MIMAT0019166 AAGJ06000001.1 27024190 27024252 + S. purpuratus Eumetazoa No 1 1
Spu-Mir-10-P2n None MIR-10 ACCCGUA None None AAGJ06000001.1 27027636 27027697 + S. purpuratus Eumetazoa Unknown 1
Spu-Mir-10-P3 spu-mir-125 MIR-10 CCCUGAG MIMAT0009667 MIMAT0019161 AAGJ06000001.1 27044734 27044796 + Bilateria Eumetazoa No 1 1
Spu-Mir-22-P2 None MIR-22 CAGCUGC None None AAGJ06000817.1 381359 381427 + Bilateria Bilateria No 1 1
Spu-Mir-29-P1 spu-mir-29a MIR-29 AGCACCA None MIMAT0009656 AAGJ06000828.1 34320 34384 + Bilateria Bilateria No 1 1
Spu-Mir-29-P2 spu-mir-29b MIR-29 AGCACCA None MIMAT0020067 AAGJ06000006.1 22300868 22300931 + Bilateria Bilateria No 1 1
Spu-Mir-31 spu-mir-31 MIR-31 GGCAAGA MIMAT0009657 None AAGJ06000854.1 419468 419530 + Bilateria Bilateria No 1
Spu-Mir-33 spu-mir-33 MIR-33 UGCAUUG MIMAT0009658 None AAGJ06000011.1 28175102 28175163 + Bilateria Bilateria No 1 1
Spu-Mir-34 spu-mir-34 MIR-34 GGCAGUG MIMAT0009659 None AAGJ06000001.1 43627763 43627823 - Bilateria Bilateria No 1 1
Spu-Mir-71 spu-mir-71 MIR-71 GAAAGAC MIMAT0009660 None AAGJ06000008.1 10606961 10607022 + Nephrozoa Nephrozoa No 1
Spu-Mir-76 spu-mir-981 MIR-76 UCGUUGU None MIMAT0020068 AAGJ06000011.1 20172220 20172283 + Nephrozoa Nephrozoa Unknown
Spu-Mir-92-o13 None MIR-92 AUUGCAC None None AAGJ06000006.1 26954701 26954769 - S. purpuratus Bilateria No 1 1 1
Spu-Mir-92-o14 spu-mir-92b MIR-92 AUUGCAC MIMAT0019160 MIMAT0009663 AAGJ06000006.1 26946651 26946718 - S. purpuratus Bilateria No 1
Spu-Mir-92-o15 spu-mir-92c MIR-92 AUUGCAC None MIMAT0009664 AAGJ06000006.1 26944977 26945042 - S. purpuratus Bilateria No
Spu-Mir-92-o16 spu-mir-92a MIR-92 AUUGCAC None MIMAT0009662 AAGJ06000006.1 26944529 26944593 - S. purpuratus Bilateria No 1
Spu-Mir-92-o17 None MIR-92 AUUGCAC None None AAGJ06000006.1 26943673 26943760 - S. purpuratus Bilateria No 1
Spu-Mir-92-o18 None MIR-92 AUUGCAC None None AAGJ06000006.1 15043892 15043954 - S. purpuratus Bilateria No 1 1
Spu-Mir-92-o19 None MIR-92 AUUGCAC None None AAGJ06000006.1 15043364 15043426 - S. purpuratus Bilateria No 1
Spu-Mir-92-o20 None MIR-92 AUUGCAC None None AAGJ06000006.1 15042909 15042971 - S. purpuratus Bilateria No 1 1 1
Spu-Mir-96-P1 spu-mir-96 MIR-96 UUGGCAC MIMAT0009665 None AAGJ06000857.1 2626661 2626734 + Bilateria Bilateria No 1 1
Spu-Mir-96-P2 spu-mir-182 MIR-96 UUGGCAA MIMAT0009670 None AAGJ06000006.1 25941362 25941428 + Bilateria Bilateria No
Spu-Mir-96-P3 spu-mir-183 MIR-96 AUGGCAC MIMAT0009684 None AAGJ06000857.1 2625088 2625155 + Bilateria Bilateria No 1
Spu-Mir-103 spu-mir-2013 MIR-103 GCAGCAU None MIMAT0009742 AAGJ06000817.1 383311 383375 + Bilateria Bilateria No 1 1 1
Spu-Mir-124 spu-mir-124 MIR-124 AAGGCAC None MIMAT0009666 AAGJ06000013.1 11029956 11030016 - Bilateria Bilateria No
Spu-Mir-133 spu-mir-133 MIR-133 UUGGUCC None MIMAT0009668 AAGJ06000013.1 7381050 7381111 + Bilateria Bilateria No 1 1
Spu-Mir-137 spu-mir-137 MIR-137 UAUUGCU None MIMAT0009645 AAGJ06000003.1 21105352 21105409 + Bilateria Bilateria No 1
Spu-Mir-153 spu-mir-153 MIR-153 UGCAUAG MIMAT0019162 MIMAT0009669 AAGJ06000019.1 10025885 10025953 - Bilateria Bilateria No
Spu-Mir-184 spu-mir-184 MIR-184 GGACGGA None MIMAT0009671 AAGJ06000835.1 622355 622424 + Nephrozoa Nephrozoa No 1 1
Spu-Mir-193-P2 None MIR-193 AAUGCCC None None AAGJ06000014.1 16475259 16475346 + Bilateria Bilateria No 1
Spu-Mir-210-v1 spu-mir-210 MIR-210 UGUGCGU None MIMAT0009646 AAGJ06000018.1 27105558 27105624 + Bilateria Bilateria No 1
Spu-Mir-210-v2 spu-mir-210 MIR-210 UUGUGCG None MIMAT0009646 AAGJ06000018.1 27105558 27105624 + Bilateria Bilateria No 1
Spu-Mir-219 spu-mir-219 MIR-219 GAUUGUC MIMAT0009685 MIMAT0022953 AAGJ06000004.1 25977850 25977910 - Bilateria Bilateria No 1
Spu-Mir-242 spu-mir-242 MIR-242 UGCGUAG MIMAT0009647 None AAGJ06000857.1 1093867 1093927 - Nephrozoa Nephrozoa No
Spu-Mir-252-P1 spu-mir-252b MIR-252 UAAGUAG MIMAT0009673 None AAGJ06000015.1 475408 475467 + Bilateria Bilateria No
Spu-Mir-252-P2 spu-mir-252a MIR-252 UAAGUAC MIMAT0009672 None AAGJ06000015.1 476786 476869 + Bilateria Bilateria No 1
Spu-Mir-278 spu-mir-278 MIR-278 CGGUGGG MIMAT0019163 MIMAT0009674 AAGJ06000002.1 25922652 25922716 - Bilateria Bilateria No 1
Spu-Mir-375 spu-mir-375 MIR-375 UUGUUCG None MIMAT0009648 AAGJ06000019.1 21884819 21884903 + Nephrozoa Nephrozoa No 1
Spu-Mir-2001 spu-mir-2001 MIR-2001 UGUGACC MIMAT0009740 None AAGJ06000015.1 468208 468268 + Bilateria Bilateria No 1
Spu-Mir-2002 spu-mir-2002 MIR-2002 GAAUACA MIMAT0019165 MIMAT0009743 AAGJ06000001.1 43632827 43632891 - Eleutherozoa Eleutherozoa No 1 1
Spu-Mir-2004 spu-mir-2004 MIR-2004 CACACAC None MIMAT0009745 AAGJ06000009.1 7155334 7155398 - Eleutherozoa Eleutherozoa No 1 1
Spu-Mir-2005 spu-mir-2005 MIR-2005 GUCCAAU MIMAT0009746 None AAGJ06000820.1 1476067 1476130 - Eleutherozoa Eleutherozoa Unknown 1
Spu-Mir-2006 spu-mir-2006 MIR-2006 AGCACAC None MIMAT0009747 AAGJ06000002.1 37442211 37442279 - Ambulacraria Ambulacraria Yes 1
Spu-Mir-2007 spu-mir-2007 MIR-2007 AUUUCAG MIMAT0009748 None AAGJ06000006.1 42333222 42333290 + Ambulacraria Ambulacraria No
Spu-Mir-2008 spu-mir-2008 MIR-2008 UAUUAAC None MIMAT0009749 AAGJ06000010.1 6802287 6802345 - Ambulacraria Ambulacraria No 1
Spu-Mir-2009 spu-mir-2009 MIR-2009 GAGUUGU None MIMAT0009750 AAGJ06000835.1 1151464 1151524 - Ambulacraria Ambulacraria No
Spu-Mir-2010 spu-mir-2010 MIR-2010 UACUGUU None MIMAT0009751 AAGJ06000012.1 33083243 33083307 - Eleutherozoa Eleutherozoa No 1 1 1
Spu-Mir-2011 spu-mir-2011 MIR-2011 CAAGGUG None MIMAT0009752 AAGJ06000016.1 28635498 28635558 + Ambulacraria Ambulacraria No 1
Spu-Mir-2012 spu-mir-2012 MIR-2012 AGUACUG MIMAT0009741 None AAGJ06000018.1 2474077 2474140 - Ambulacraria Ambulacraria No 1
Spu-Mir-4847 spu-mir-4847 MIR-4847 AAUGAUG MIMAT0020069 None AAGJ06000004.1 4948627 4948690 - S. purpuratus S. purpuratus Unknown 1
Spu-Novel-1-P1a None SPU-NOVEL-1 UUUAUGA None None AAGJ06000868.1 418239 418302 - S. purpuratus S. purpuratus No 1
Spu-Novel-1-P1b None SPU-NOVEL-1 UUUAUGA None None AAGJ06000004.1 20054437 20054500 + S. purpuratus S. purpuratus No 1
Spu-Novel-2-P1a None SPU-NOVEL-2 AUAUGAU None None AAGJ06000868.1 421541 421599 - S. purpuratus S. purpuratus No 1
Spu-Novel-2-P1b None SPU-NOVEL-2 AUAUGAU None None AAGJ06000004.1 20050681 20050739 + S. purpuratus S. purpuratus No 1

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