MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-71-P2

Family name MIR-71 (all species)
Seed GAAAGAC
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-71-P1  Efe-Mir-71-P3 
Orthologues Aae-Mir-71  Aga-Mir-71  Agr-Mir-71  Asu-Mir-71  Bfl-Mir-71  Bge-Mir-71  Bla-Mir-71  Cbr-Mir-71  Cel-Mir-71  Cte-Mir-71  Dgr-Mir-71  Dlo-Mir-71  Dma-Mir-71  Dpu-Mir-71  Egr-Mir-71  Esc-Mir-71  Hme-Mir-71  Hru-Mir-71  Isc-Mir-71  Lgi-Mir-71  Lhy-Mir-71  Llo-Mir-71  Mgi-Mir-71  Mom-Mir-71  Npo-Mir-71  Obi-Mir-71  Ofu-Mir-71  Ovu-Mir-71  Pau-Mir-71  Pca-Mir-71  Pdu-Mir-71  Pfl-Mir-71  Ple-Mir-71  Pmi-Mir-71  Pve-Mir-71  Rph-Mir-71  Sko-Mir-71  Sme-Mir-71-o2  Snu-Mir-71  Spu-Mir-71  Tca-Mir-71  War-Mir-71 
Node of Origin (locus) E. fetida
Node of Origin (family) Nephrozoa
Genome context
(Efe_combined)		 Efet.01.1057065: 32-94 [-]
Precursor
(pre-Mir +30nt flank)
GUUGGUAGAGCACGUGAAAGAUGAACCGUGUGAAAGACAUGGGUAGUGAGAUGCUGCCAAAUUCUCUGGUAUCUUACUACAAUGUCUUUUGACAAGGAUUGCAUCACUGUNNNNNNNNNNNNN
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Structure
        10        20          30         40        50        60 
GUUGGUAGAGCACGUGAAA    AA--  G   -|        GG           CUGCCAA 
                   GAUG    CC UGU GAAAGACAU  GUAGUGAGAUG       A
                   CUAC    GG ACA UUUUCUGUA  CAUCAUUCUAU       U
NNNNNNNNNNNNNUGUCA-    GUUA  A   G^        A-           GGUCUCU 
 120       110        100        90         80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Mature sequence

Efe-Mir-71-P2_5p
mirBase accessionNone
Sequence 
0- UGAAAGACAUGGGUAGUGAGAUG -23
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Star sequence

Efe-Mir-71-P2_3p*
mirBase accessionNone
Sequence 
41- UCUUACUACAAUGUCUUUUGAC -63
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