| MirGeneDB ID | Csc-Novel-4-P1c |
|---|
| Family name |
CSC-NOVEL-4 (all species) |
|---|
| Seed |
CAUGUUG |
|---|
| Species |
Arizona bark scorpion (Centruroides sculpturatus) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Csc-Novel-4-P1a
Csc-Novel-4-P1b
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
C. sculpturatus
|
|---|
| Node of Origin (family) |
C. sculpturatus
|
|---|
Genome context
(GCF_000671375.1_CSC) |
NW_019385009.1: 283970-284027 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
ACAGUAUAUCUUCUUUCAUAACUCGUAAGGUCAUGUUGCCUCAUCAUUCUGUUACAAAACAAGACAGGAUGAUGGAGACAACGCGACCUUAAGAGUAUAAUAAAAUCUCCCGGUUCAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
ACAGUAUAUCUUCUUUCAUA-- G A C -| UACAA
ACUC UAAGGUC UGUUG CU CAUCAUUCUGU \
UGAG AUUCCAG GCAAC GA GUAGUAGGACA A
CACUUGGCCCUCUAAAAUAAUA A C A G^ GAACA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
|
|---|
| Mature sequence |
Csc-Novel-4-P1c_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UCAUGUUGCCUCAUCAUUCUGU -22
Get sequence
|
|---|
| Co-mature sequence |
Csc-Novel-4-P1c_3p |
| mirBase accession | None |
|---|
| Sequence |
35- AGGAUGAUGGAGACAACGCGACC -58
Get sequence
|
|---|
