| MirGeneDB ID | Csc-Let-7-P18a |
|---|
| Family name |
LET-7 (all species) |
|---|
| Seed |
GAGGUAG |
|---|
| Species |
Arizona bark scorpion (Centruroides sculpturatus) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Csc-Let-7-P18b
|
|---|
| Orthologues |
Aae-Let-7
Aga-Let-7
Agr-Let-7
Bge-Let-7
Bko-Let-7
Bpl-Let-7
Cte-Let-7
Dan-Let-7
Dlo-Let-7
Dma-Let-7
Dme-Let-7
Dmo-Let-7
Dpu-Let-7
Dsi-Let-7
Dya-Let-7
Eba-Let-7
Egr-Let-7
Esc-Let-7
Gpa-Let-7
Gsa-Let-7
Gsp-Let-7
Hme-Let-7
Hmi-Let-7
Hru-Let-7
Isc-Let-7
Lan-Let-7
Lgi-Let-7
Lhy-Let-7
Llo-Let-7
Mgi-Let-7
Mom-Let-7
Npo-Let-7
Obi-Let-7
Ofu-Let-7
Ovu-Let-7
Pau-Let-7
Pca-Let-7
Pcr-Let-7
Pdu-Let-7
Pfl-Let-7
Ple-Let-7
Pmi-Let-7
Pve-Let-7
Rph-Let-7
Sko-Let-7
Sma-Let-7
Sne-Let-7
Snu-Let-7
Spu-Let-7
Sro-Let-7
Tca-Let-7
Tur-Let-7
War-Let-7
Xbo-Let-7
|
|---|
| Node of Origin (locus) |
C. sculpturatus
|
|---|
| Node of Origin (family) |
Bilateria
|
|---|
Genome context
(GCF_000671375.1_CSC) |
NW_019384344.1: 388884-388951 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CUUUGUCCUCAAGAACAUGUGUGCCCGGUGUGAGGUAGUAGGUUGUAUAGUUGAGAACUACAUCCAUCAGGAGAACUGUACAACUUGCUAACUUUCCCUGGGACACACCCAAUCACCGAUAGAAGACU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CUUUGUCCUCAAGAACAU-- -| UGU G GAGAACUACA
GUGUG CCCGG GAG UAGUAGGUUGUAUAGUU \
CACAC GGGUC UUC AUCGUUCAACAUGUCAA U
UCAGAAGAUAGCCACUAACC A^ CCU A GAGGACUACC
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Csc-Let-7-P18a_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGAGGUAGUAGGUUGUAUAGUU -22
Get sequence
|
|---|
| Star sequence |
Csc-Let-7-P18a_3p* |
| mirBase accession | None |
|---|
| Sequence |
45- CUGUACAACUUGCUAACUUUCCC -68
Get sequence
|
|---|
