MirGeneDB 3.0
MirGeneDB ID

Csc-Mir-96-P2w

Family name MIR-96 (all species)
Seed UUGGCAC
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-96-P1w  Csc-Mir-96-P1x  Csc-Mir-96-P3w  Csc-Mir-96-P3x 
Orthologues Aae-Mir-96-P2  Aca-Mir-96-P2  Aga-Mir-96-P2  Agr-Mir-96-P2  Ami-Mir-96-P2  Asu-Mir-96-P2  Ava-Mir-96-o2  Bge-Mir-96-P2  Bta-Mir-96-P2  Cel-Mir-96-P2  Cfa-Mir-96-P2  Cin-Mir-96-P2  Cja-Mir-96-P2  Cli-Mir-96-P2  Cmi-Mir-96-P2  Cpi-Mir-96-P2  Cpo-Mir-96-P2  Cte-Mir-96-P2  Dan-Mir-96-P2  Dlo-Mir-96-P2  Dma-Mir-96-P2-v1  Dma-Mir-96-P2-v2  Dme-Mir-96-P2  Dno-Mir-96-P2  Dpu-Mir-96-P2-v1  Dpu-Mir-96-P2-v2  Dsi-Mir-96-P2  Dya-Mir-96-P2  Eba-Mir-96-P2  Eca-Mir-96-P2  Ete-Mir-96-P2  Gga-Mir-96-P2  Gja-Mir-96-P2  Gpa-Mir-96-P2  Hme-Mir-96-P2  Hru-Mir-96-P2  Hsa-Mir-96-P2  Isc-Mir-96-P2  Laf-Mir-96-P2  Lan-Mir-96-P2  Lch-Mir-96-P2  Lgi-Mir-96-P2  Lhy-Mir-96-P2  Llo-Mir-96-P2-v1  Llo-Mir-96-P2-v2  Loc-Mir-96-P2  Mdo-Mir-96-P2  Mml-Mir-96-P2  Mmr-Mir-96-P2  Mmu-Mir-96-P2  Mun-Mir-96-P2  Neu-Mir-96-P2  Npo-Mir-96-P2  Oan-Mir-96-P2  Obi-Mir-96-P2  Ocu-Mir-96-P2  Ofu-Mir-96-P2  Ovu-Mir-96-P2  Pab-Mir-96-P2  Pau-Mir-96-P2  Pbv-Mir-96-P2  Pca-Mir-96-P2  Pdu-Mir-96-P2  Pfl-Mir-96-P2  Pmi-Mir-96-P2  Pve-Mir-96-P2  Rno-Mir-96-P2  Rph-Mir-96-P2  Sha-Mir-96-P2  Sko-Mir-96-P2  Snu-Mir-96-P2  Spt-Mir-96-P2  Spu-Mir-96-P2  Sto-Mir-96-P2  Tca-Mir-96-P2  Tgu-Mir-96-P2  Tur-Mir-96-P2  War-Mir-96-P2  Xtr-Mir-96-P2 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Bilateria
Genome context
(GCF_000671375.1_CSC)		 NW_019385290.1: 224908-224968 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GGAACCGUCCCGUCGUCGGUUUCCCUUAUUCUUGGCACUGGAAGAAUUCACAGAUGUGGUCGGAAAGUCGUGGGUUCUUGGGUGCCAAAGAUAAAGGAAUUCCGUCCAACACCCAGGCGGG
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Structure
        10         20         30        40        50        60 
GGAACCGUCCCGUCGUC-  U-|   C    UC        G  A        A  UGUGGU 
                  GG  UUCC UUAU  UUGGCACU GA GAAUUCAC GA      \
                  CC  AAGG AAUA  AACCGUGG UU CUUGGGUG CU      C
GGGCGGACCCACAACCUG  UU^   A    GA        G  -        -  GAAAGG 
 .       110       100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma
Mature sequence

Csc-Mir-96-P2w_5p
mirBase accessionNone
Sequence 
0- CUUGGCACUGGAAGAAUUCACAGA -24
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Star sequence

Csc-Mir-96-P2w_3p*
mirBase accessionNone
Sequence 
38- CGUGGGUUCUUGGGUGCCAAAGA -61
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