MirGeneDB 2.1

MirGeneDB ID

Dme-Mir-96-P2

Family name MIR-96 (all species)
Seed UUGGCAC
Species Fruit fly (Drosophila melanogaster)
MiRBase ID dme-mir-263b
Paralogues Dme-Mir-96-P3 
Orthologues Aae-Mir-96-P2  Aca-Mir-96-P2  Ami-Mir-96-P2  Asu-Mir-96-P2  Bfl-Mir-96-P2f  Bfl-Mir-96-P2g  Bfl-Mir-96-P2h  Bfl-Mir-96-P2i  Bfl-Mir-96-P2j  Bfl-Mir-96-P2k  Bge-Mir-96-P2  Bla-Mir-96-P2f  Bla-Mir-96-P2g  Bla-Mir-96-P2h  Bla-Mir-96-P2i  Bla-Mir-96-P2j  Bla-Mir-96-P2k  Bta-Mir-96-P2  Cbr-Mir-96-P2p  Cbr-Mir-96-P2q  Cel-Mir-96-P2  Cfa-Mir-96-P2  Cgi-Mir-96-P2l  Cgi-Mir-96-P2m  Cin-Mir-96-P2  Cli-Mir-96-P2  Cmi-Mir-96-P2  Cpi-Mir-96-P2  Cpo-Mir-96-P2  Csc-Mir-96-P2w  Cte-Mir-96-P2  Dan-Mir-96-P2  Dma-Mir-96-P2  Dno-Mir-96-P2  Dpu-Mir-96-P2  Dre-Mir-96-P2a  Dsi-Mir-96-P2  Dya-Mir-96-P2  Ebu-Mir-96-P2e  Efe-Mir-96-P2n  Efe-Mir-96-P2o  Ete-Mir-96-P2  Gga-Mir-96-P2  Gja-Mir-96-P2  Gmo-Mir-96-P2a  Hme-Mir-96-P2  Hsa-Mir-96-P2  Isc-Mir-96-P2  Lan-Mir-96-P2  Lch-Mir-96-P2  Lgi-Mir-96-P2  Loc-Mir-96-P2  Lpo-Mir-96-P2r  Lpo-Mir-96-P2s-v1  Lpo-Mir-96-P2s-v2  Lpo-Mir-96-P2t-v1  Lpo-Mir-96-P2t-v2  Lpo-Mir-96-P2u  Lpo-Mir-96-P2v-v1  Lpo-Mir-96-P2v-v2  Mal-Mir-96-P2a  Mal-Mir-96-P2b  Mdo-Mir-96-P2  Mml-Mir-96-P2  Mmu-Mir-96-P2  Mun-Mir-96-P2  Npo-Mir-96-P2  Oan-Mir-96-P2  Obi-Mir-96-P2  Ocu-Mir-96-P2  Ovu-Mir-96-P2  Pbv-Mir-96-P2  Pfl-Mir-96-P2  Pma-Mir-96-P2o1  Pmi-Mir-96-P2  Rno-Mir-96-P2  Sha-Mir-96-P2  Sko-Mir-96-P2  Spt-Mir-96-P2  Spu-Mir-96-P2  Sto-Mir-96-P2  Tca-Mir-96-P2  Tgu-Mir-96-P2  Tni-Mir-96-P2a  Tni-Mir-96-P2b  Xla-Mir-96-P2c  Xla-Mir-96-P2d  Xtr-Mir-96-P2 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Drosophila_melanogaster_BDGP6)
3L: 15843420-15843480 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGUAGCUCUUCAAUUUGCUGACUUUGAGUCUUGGCACUGGGAGAAUUCACAGUUGACUUUAUUAUUCUGUGGUUCUGCGGGUGCCAAAACUUAAAAACCGGCUUUGUACAACGAUUUCUA
Get precursor sequence
Structure
        10         20         30        40        50        60
CUGUAGCUCUUCAAUUU-    AC-|      C        GGG     U     UUGACU 
                  GCUG   UUUGAGU UUGGCACU   AGAAU CACAG      U
                  CGGC   AAAUUCA AACCGUGG   UCUUG GUGUC      U
AUCUUUAGCAACAUGUUU    CAA^      A        GCG     -     UUAUUA 
 .       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Bo He L3 Fe Fe La Wh
Mature sequence

Dme-Mir-96-P2_5p

mirBase accessionMIMAT0000362
Sequence
0- CUUGGCACUGGGAGAAUUCACAG -23
Get sequence
Proposed targets microrna.org: MIMAT0000362
TargetScanFly: dme-miR-263b
Star sequence

Dme-Mir-96-P2_3p*

mirBase accessionMIMAT0020822
Sequence
39- GUGGUUCUGCGGGUGCCAAAAC -61
Get sequence