| MirGeneDB ID | Csc-Mir-92-P13 |
|---|
| Family name |
MIR-92 (all species) |
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| Seed |
AUUGCAC |
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| Species |
Arizona bark scorpion (Centruroides sculpturatus) |
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| MiRBase ID |
|
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| Paralogues |
Csc-Mir-92-P12
|
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| Orthologues |
Asu-Mir-92
Cel-Mir-92
Esc-Mir-92
Gsp-Mir-92
Hmi-Mir-92
Isc-Mir-92
Obi-Mir-92
Sme-Mir-92
Spu-Mir-92-o13
|
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| Node of Origin (locus) |
C. sculpturatus
|
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| Node of Origin (family) |
Bilateria
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Genome context
(GCF_000671375.1_CSC) |
NW_019384629.1: 792402-792459 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAUUAUUAAUUAGUUUAAUUAACCCUGGCCAGGUCCGGAUGGGCGACAAUAUUGUGUAGCGAACAAUAUUGCACUCGUCCCGGCCUAUCUUGGGCUAUCAUUGCUUCAAAUUCAUGCA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AAUUAUUAAUUAGUUUAAUUAA--| U CC C CGA GUGUA
CCC GG AGGUC GGAUGGG CAAUAUU \
GGG UC UCCGG CCUGCUC GUUAUAA G
ACGUACUUAAACUUCGUUACUAUC^ U UA C AC- CAAGC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
|
|
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| Star sequence |
Csc-Mir-92-P13_5p* |
| mirBase accession | None |
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| Sequence |
0- AGGUCCGGAUGGGCGACAAUAUU -23
Get sequence
|
|---|
| Mature sequence |
Csc-Mir-92-P13_3p |
| mirBase accession | None |
|---|
| Sequence |
36- UAUUGCACUCGUCCCGGCCUAU -58
Get sequence
|
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