MirGeneDB 3.0

MirGeneDB ID

Csc-Mir-210-P14

Family name MIR-210 (all species)
Seed UGUGCGU
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-210-P13a  Csc-Mir-210-P13b 
Orthologues Aca-Mir-210  Agr-Mir-210  Ami-Mir-210  Bfl-Mir-210  Bla-Mir-210  Bta-Mir-210  Cfa-Mir-210  Cja-Mir-210  Cli-Mir-210  Cmi-Mir-210  Cpi-Mir-210  Cpo-Mir-210  Dgr-Mir-210  Dma-Mir-210  Dno-Mir-210  Dpu-Mir-210  Dre-Mir-210  Eba-Mir-210  Ebu-Mir-210  Eca-Mir-210  Egr-Mir-210  Ete-Mir-210  Gga-Mir-210  Gja-Mir-210  Gmo-Mir-210  Hsa-Mir-210  Isc-Mir-210  Lan-Mir-210  Lch-Mir-210  Lgi-Mir-210  Lhy-Mir-210  Llo-Mir-210  Loc-Mir-210  Mal-Mir-210  Mdo-Mir-210  Mgi-Mir-210  Mml-Mir-210  Mmr-Mir-210  Mmu-Mir-210  Mom-Mir-210  Mun-Mir-210  Neu-Mir-210  Npo-Mir-210  Oan-Mir-210  Ocu-Mir-210  Ofu-Mir-210  Pab-Mir-210  Pau-Mir-210  Pbv-Mir-210  Pca-Mir-210  Pma-Mir-210  Rno-Mir-210  Sha-Mir-210  Sko-Mir-210  Sma-Mir-210  Snu-Mir-210  Spt-Mir-210  Tgu-Mir-210  Tni-Mir-210  War-Mir-210  Xtr-Mir-210 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Bilateria
Genome context
(GCF_000671375.1_CSC)
NW_019385932.1: 51022-51079 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GUGCUGGUUCUUCACGUGAGACGUCCACAGUAGCUGCUGGACACGGCACAAGAUAUCCGUCGAUUCUUGUGCGUGUGACAGCGGCUAUCGUAUAACGUCAUGUAUCAUCCAGACGGAA
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Structure
        10        20         30        40         50         
GUGCUGGUUCUUCACGUGA     CC-  A          G-|    G       UAUCC 
                   GACGU   AC GUAGCUGCUG  ACACG CACAAGA     \
                   CUGCA   UG UAUCGGCGAC  UGUGC GUGUUCU     G
AAGGCAGACCUACUAUGUA     AUA  C          AG^    -       UAGCU 
      110       100        90        80         70        60
Deep sequencing
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CommentThere is a second Drosha cut +1 on the 5p arm, likely the result of non-monouridylated 3' termini.
3' NTU Yes
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Fe Fe Fe Fe Ma Ma Ma
Star sequence

Csc-Mir-210-P14_5p*

mirBase accessionNone
Sequence
0- UAGCUGCUGGACACGGCACAAGA -23
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Mature sequence

Csc-Mir-210-P14_3p

mirBase accessionNone
Sequence
36- UUGUGCGUGUGACAGCGGCUAU -58
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