MirGeneDB ID | Csc-Mir-67-P13 |
Family name |
MIR-67 (all species) |
Seed |
CACAACC |
Species |
Arizona bark scorpion (Centruroides sculpturatus) |
MiRBase ID |
|
Paralogues |
Csc-Mir-67-P12
|
Orthologues |
Asu-Mir-67
Bge-Mir-67
Cbr-Mir-67
Cel-Mir-67
Cte-Mir-67
Dgr-Mir-67
Dma-Mir-67
Dpu-Mir-67
Egr-Mir-67
Gpa-Mir-67-P13-v1
Gpa-Mir-67-P13-v2
Gsa-Mir-67
Hru-Mir-67
Isc-Mir-67
Lan-Mir-67
Lgi-Mir-67
Npo-Mir-67
Obi-Mir-67
Ofu-Mir-67
Ovu-Mir-67
Pau-Mir-67
Pca-Mir-67
Pdu-Mir-67
Sma-Mir-67
Sme-Mir-67
Snu-Mir-67
Tur-Mir-67
|
Node of Origin (locus) |
C. sculpturatus
|
Node of Origin (family) |
Protostomia
|
Genome context (GCF_000671375.1_CSC) |
NW_019384666.1: 682071-682130 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
ACUCCGAAGGCAGGUGUCCGGUCGUACUCUCCUCACUCACCCUGGUUGUGGUGCGGAUUAUCCAUCAUCACAACCUCCGAGAGUGAGCAAAGUCGAUCGGAAAUAUCGACGACAUCCGUU
Get precursor sequence
|
Structure | 10 20 30 40 50
ACUCCGAAGGCAGGUGU---| U CUC ACCCU CGGAU
CCGGUCG ACU CUCACUC GGUUGUGGUG U
GGCUAGC UGA GAGUGAG CCAACACUAC A
UUGCCUACAGCAGCUAUAAA^ - AAC AGCCU UACCU
. 110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Csc-Mir-67-P13_5p* |
mirBase accession | None |
Sequence |
0- CCUCACUCACCCUGGUUGUGGUG -23
Get sequence
|
Mature sequence |
Csc-Mir-67-P13_3p |
mirBase accession | None |
Sequence |
37- UCACAACCUCCGAGAGUGAGCAA -60
Get sequence
|