MirGeneDB 3.0
MirGeneDB ID

Gsa-Mir-67

Family name MIR-67 (all species)
Seed CACAACC
Species Russian doll killer (Gyrodactylus salaris)
MiRBase ID gsa-mir-67
Paralogues
Orthologues Aae-Mir-67-v1  Aae-Mir-67-v2  Aga-Mir-67-v1  Aga-Mir-67-v2  Agr-Mir-67-v1  Agr-Mir-67-v2  Asu-Mir-67  Bge-Mir-67  Cbr-Mir-67  Cel-Mir-67  Csc-Mir-67-P12  Csc-Mir-67-P13  Cte-Mir-67  Dan-Mir-67-v1  Dan-Mir-67-v2  Dgr-Mir-67  Dlo-Mir-67-P14-v1  Dlo-Mir-67-P14-v2  Dlo-Mir-67-P14-v3  Dlo-Mir-67-P15-v1  Dlo-Mir-67-P15-v2  Dma-Mir-67  Dme-Mir-67-v1  Dme-Mir-67-v2  Dme-Mir-67-v3  Dmo-Mir-67-v1  Dmo-Mir-67-v2  Dpu-Mir-67  Dsi-Mir-67-v1  Dsi-Mir-67-v2  Dsi-Mir-67-v3  Dya-Mir-67-v1  Dya-Mir-67-v2  Dya-Mir-67-v3  Eba-Mir-67-v1  Eba-Mir-67-v2  Efe-Mir-67-P1  Efe-Mir-67-P2  Efe-Mir-67-P3  Egr-Mir-67  Gpa-Mir-67-P12-v1  Gpa-Mir-67-P12-v2  Gpa-Mir-67-P13-v1  Gpa-Mir-67-P13-v2  Hme-Mir-67-v1  Hme-Mir-67-v2  Hru-Mir-67  Isc-Mir-67  Lan-Mir-67  Lgi-Mir-67  Lpo-Mir-67-P7  Lpo-Mir-67-P8  Lpo-Mir-67-P9  Lpo-Mir-67-P10  Lpo-Mir-67-P11  Mgi-Mir-67-P4  Mgi-Mir-67-P5  Mgi-Mir-67-P6  Mom-Mir-67-v1  Mom-Mir-67-v2  Npo-Mir-67  Obi-Mir-67  Ofu-Mir-67  Ovu-Mir-67  Pau-Mir-67  Pca-Mir-67  Pcr-Mir-67-v1  Pcr-Mir-67-v2  Pdu-Mir-67  Pve-Mir-67-v1  Pve-Mir-67-v2  Rph-Mir-67-v1  Rph-Mir-67-v2  Sma-Mir-67  Sme-Mir-67  Snu-Mir-67  Tca-Mir-67-v1  Tca-Mir-67-v2  Tca-Mir-67-v3  Tur-Mir-67  War-Mir-67-v1  War-Mir-67-v2 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(gyrodactylus_salaris.PRJNA244375.WBPS19.genomic)		 scf7180006949532: 22977-23036 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUUGAAUGAACUUGAUAAGCUUUCUUAAUUUCUCACAAUGGAGGUUGAGCGCAAUUCUGACCGUUGUCACAACCUCCUUGAUUGAGAUGAUAAAGAAGAGGGAAAACAGCAGAGUUUAUG
Get precursor sequence
Structure
        10        20        30              40        50         
GUUGAAUGAACUUGAUAAG       AAUU----     --|  U        AGC   AUUCU 
                   CUUUCUU        UCUCA  CAA GGAGGUUG   GCA     \
                   GGGAGAA        AGAGU  GUU CCUCCAAC   UGU     G
GUAUUUGAGACGACAAAA-       GAAAUAGU     UA^  -        AC-   UGCCA 
.       110        100        90        80         70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Gs
Star sequence

Gsa-Mir-67_5p*
mirBase accessionMIMAT0035262
Sequence 
0- UCUCACAAUGGAGGUUGAGCGCA -23
Get sequence
Mature sequence

Gsa-Mir-67_3p
mirBase accessionMIMAT0035263
Sequence 
36- UCACAACCUCCUUGAUUGAGAUGA -60
Get sequence