MirGeneDB 3.0
MirGeneDB ID

Mgi-Mir-67-P6

Family name MIR-67 (all species)
Seed CACAACC
Species Pacific oyster (Magallana gigas)
MiRBase ID
Paralogues Mgi-Mir-67-P4  Mgi-Mir-67-P5 
Orthologues Asu-Mir-67  Bge-Mir-67  Cbr-Mir-67  Cel-Mir-67  Cte-Mir-67  Dgr-Mir-67  Dma-Mir-67  Dpu-Mir-67  Egr-Mir-67  Gsa-Mir-67  Hru-Mir-67  Isc-Mir-67  Lan-Mir-67  Lgi-Mir-67  Npo-Mir-67  Obi-Mir-67  Ofu-Mir-67  Ovu-Mir-67  Pau-Mir-67  Pca-Mir-67  Pdu-Mir-67  Sma-Mir-67  Sme-Mir-67  Snu-Mir-67  Tur-Mir-67 
Node of Origin (locus) C. gigas
Node of Origin (family) Protostomia
Genome context
(CGI_GCA_000297895.1)		 scaffold226: 224596-224654 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GAUGACCAUCAGAACUUGUAAAUCACGUGACCUUGUUCGGCCUGGUUGUUAUGUGGACAUGUGACAUCACAACCUGCAUGAAUGAGGGCAUGUGGUUCAAUUCUUUCGACGUAUUCCAU
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Structure
        10        20          30         40        50         
GAUGACCAUCAGAACUUGUA--         A   UG    -| CU      U   UGGAC 
                      AAUCACGUG CCU  UUCG GC  GGUUGU AUG     \
                      UUGGUGUAC GGA  AAGU CG  CCAACA UAC     A
UACCUUAUGCAGCUUUCUUAAC         G   GU    A^ U-      C   AGUGU 
       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
A- D- D- F- L- Ea Eg Fe Gi Ha He Ju La Ma Ma Ma Pe Re Sp Um
Star sequence

Mgi-Mir-67-P6_5p*
mirBase accessionNone
Sequence 
0- CCUUGUUCGGCCUGGUUGUUAUG -23
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Mature sequence

Mgi-Mir-67-P6_3p
mirBase accessionNone
Sequence 
36- UCACAACCUGCAUGAAUGAGGGC -59
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