MirGeneDB 3.0
MirGeneDB ID

Tur-Mir-67

Family name MIR-67 (all species)
Seed CACAACC
Species Two-spotted spider mite (Tetranychus urticae)
MiRBase ID tur-mir-307
Paralogues
Orthologues Aae-Mir-67-v1  Aae-Mir-67-v2  Aga-Mir-67-v1  Aga-Mir-67-v2  Agr-Mir-67-v1  Agr-Mir-67-v2  Asu-Mir-67  Bge-Mir-67  Cbr-Mir-67  Cel-Mir-67  Csc-Mir-67-P12  Csc-Mir-67-P13  Cte-Mir-67  Dan-Mir-67-v1  Dan-Mir-67-v2  Dgr-Mir-67  Dlo-Mir-67-P14-v1  Dlo-Mir-67-P14-v2  Dlo-Mir-67-P14-v3  Dlo-Mir-67-P15-v1  Dlo-Mir-67-P15-v2  Dma-Mir-67  Dme-Mir-67-v1  Dme-Mir-67-v2  Dme-Mir-67-v3  Dmo-Mir-67-v1  Dmo-Mir-67-v2  Dpu-Mir-67  Dsi-Mir-67-v1  Dsi-Mir-67-v2  Dsi-Mir-67-v3  Dya-Mir-67-v1  Dya-Mir-67-v2  Dya-Mir-67-v3  Eba-Mir-67-v1  Eba-Mir-67-v2  Efe-Mir-67-P1  Efe-Mir-67-P2  Efe-Mir-67-P3  Egr-Mir-67  Gpa-Mir-67-P12-v1  Gpa-Mir-67-P12-v2  Gpa-Mir-67-P13-v1  Gpa-Mir-67-P13-v2  Gsa-Mir-67  Hme-Mir-67-v1  Hme-Mir-67-v2  Hru-Mir-67  Isc-Mir-67  Lan-Mir-67  Lgi-Mir-67  Lpo-Mir-67-P7  Lpo-Mir-67-P8  Lpo-Mir-67-P9  Lpo-Mir-67-P10  Lpo-Mir-67-P11  Mgi-Mir-67-P4  Mgi-Mir-67-P5  Mgi-Mir-67-P6  Mom-Mir-67-v1  Mom-Mir-67-v2  Npo-Mir-67  Obi-Mir-67  Ofu-Mir-67  Ovu-Mir-67  Pau-Mir-67  Pca-Mir-67  Pcr-Mir-67-v1  Pcr-Mir-67-v2  Pdu-Mir-67  Pve-Mir-67-v1  Pve-Mir-67-v2  Rph-Mir-67-v1  Rph-Mir-67-v2  Sma-Mir-67  Sme-Mir-67  Snu-Mir-67  Tca-Mir-67-v1  Tca-Mir-67-v2  Tca-Mir-67-v3  War-Mir-67-v1  War-Mir-67-v2 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(GCA_000239435.1_ASM23943v1_genomic_TUR_traces)		 HE587317.1: 880795-880871 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AGAAAUUCAUCGAGAUCUUCAAAAAGCCUUCCUCACUCAAUCGGGUGGUGGUGUGAGAGCAGUUUCGAGCUUUUACUAAUUUCAUCACAACCUCCUUGAGUGAGUGAGGCUUUCAAUUCAAUCAUCUACUUGUAUUG
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Structure
        10        20          30        40        50        60        
AGAAAUUCAUCGAGAUCUUCAA--|      UC         UC    G   GUGUGAGAGCAGUUUCG 
                        AAAGCCU  CUCACUCAA  GGGU GUG                 \
                        UUUCGGA  GAGUGAGUU  UCCA CAC                 A
GUUAUGUUCAUCUACUAACUUAAC^      GU         CC    A   UACUUUAAUCAUUUUCG 
     130       120       110       100        90        80        70
Deep sequencing
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CommentThere are Drosha cuts -1 and -2 on both arms.
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Sr Sr Sr Sr Sr Sr Sr
Star sequence

Tur-Mir-67_5p*
mirBase accessionMIMAT0023068
Sequence 
0- CCUCACUCAAUCGGGUGGUG -20
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Mature sequence

Tur-Mir-67_3p
mirBase accessionMIMAT0023069
Sequence 
54- UCACAACCUCCUUGAGUGAGUGA -77
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