MirGeneDB 2.1
MirGeneDB ID

Dpu-Mir-67

Family name MIR-67 (all species)
Seed CACAACC
Species Common water flea (Daphnia pulex)
MiRBase ID dpu-mir-307
Paralogues
Orthologues Aae-Mir-67-v1  Aae-Mir-67-v2  Asu-Mir-67  Bge-Mir-67  Cbr-Mir-67  Cel-Mir-67  Cgi-Mir-67-P4  Cgi-Mir-67-P5  Cgi-Mir-67-P6  Csc-Mir-67  Cte-Mir-67  Dan-Mir-67-v1  Dan-Mir-67-v2  Dma-Mir-67  Dme-Mir-67-v1  Dme-Mir-67-v2  Dme-Mir-67-v3  Dmo-Mir-67-v1  Dmo-Mir-67-v2  Dsi-Mir-67-v1  Dsi-Mir-67-v2  Dsi-Mir-67-v3  Dya-Mir-67-v1  Dya-Mir-67-v2  Dya-Mir-67-v3  Efe-Mir-67-P1  Efe-Mir-67-P2  Efe-Mir-67-P3  Hme-Mir-67-v1  Hme-Mir-67-v2  Isc-Mir-67  Lan-Mir-67  Lgi-Mir-67  Lpo-Mir-67-P7  Lpo-Mir-67-P8  Lpo-Mir-67-P9  Lpo-Mir-67-P10  Lpo-Mir-67-P11  Npo-Mir-67  Obi-Mir-67  Ovu-Mir-67  Sme-Mir-67  Tca-Mir-67-v1  Tca-Mir-67-v2  Tca-Mir-67-v3 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(Daphnia_pulex.V1.0)		 DAPPUscaffold_47: 641100-641192 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AUGUAGCAGUUUUUCACUUUCGGCGACUUUCCUCGUUCAAUUUGGUUGUGGUGUAGUUUUCCAAACAAAUAUGAUCAAUUUCGGUCACUUUCUGUUUUCGUCACAACCUCCUUGAGUGAGUGAAGUAGCGAAAGAUAAUUCAUCUGCCGUAAU
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Structure
        10           20        30        40        50        60        70      
AUGUAGCAGUUUUUCAC---|    G G    UC         UUU       GU UAGUUUUCCAAACAAAUAUGAU 
                    UUUCG C ACUU  CUCGUUCAA   GGUUGUG  G                      \
                    AAAGC G UGAA  GAGUGAGUU   CCAACAC  C                      C
UAAUGCCGUCUACUUAAUAG^    - A    GU         CCU       UG UUUUGUCUUUCACUGGCUUUAA 
 150       140       130        120       110       100        90        80
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Dpu-Mir-67_5p*
mirBase accessionNone
Sequence 
0- CCUCGUUCAAUUUGGUUGUGGUG -23
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Mature sequence

Dpu-Mir-67_3p
mirBase accessionMIMAT0012665
Sequence 
70- UCACAACCUCCUUGAGUGAGUGA -93
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