Mir-67-v2

MirGeneDB ID

Dmo-Mir-67-v2

Family name

MIR-67 (all species)

Seed

ACAACCU

Species

Fruit fly (Drosophila mojavensis)

MiRBase ID

dmo-mir-307

Paralogues

Dmo-Mir-67-v1

Orthologues

Aae-Mir-67-v2 Aga-Mir-67-v2 Agr-Mir-67-v2 Asu-Mir-67 Bge-Mir-67 Cbr-Mir-67 Cel-Mir-67 Cte-Mir-67 Dan-Mir-67-v2 Dgr-Mir-67 Dma-Mir-67 Dme-Mir-67-v2 Dpu-Mir-67 Dsi-Mir-67-v2 Dya-Mir-67-v2 Eba-Mir-67-v2 Egr-Mir-67 Gsa-Mir-67 Hme-Mir-67-v2 Hru-Mir-67 Isc-Mir-67 Lan-Mir-67 Lgi-Mir-67 Mom-Mir-67-v2 Npo-Mir-67 Obi-Mir-67 Ofu-Mir-67 Ovu-Mir-67 Pau-Mir-67 Pca-Mir-67 Pcr-Mir-67-v2 Pdu-Mir-67 Pve-Mir-67-v2 Rph-Mir-67-v2 Sma-Mir-67 Sme-Mir-67 Snu-Mir-67 Tca-Mir-67-v2 Tur-Mir-67 War-Mir-67-v2

Node of Origin (locus)

Protostomia

Node of Origin (family)

Protostomia

Genome context
(Dmoj_caf1)

scaffold_6496: 24271692-24271757 [+] Ensembl

Clustered miRNAs
(< 50kb from Mir-67-v2)

Mir-67-v1 scaffold_6496: 24271692-24271757 [+] Ensembl
Mir-67-v2 scaffold_6496: 24271692-24271757 [+] Ensembl

Precursor
(pre-Mir +30nt flank)

CAAGAAAACUAAGAAUUUUGUCUUGCUUUGACUCACUCAACCUGGGUGUGAUGUUAUUUCGAUUCGGUAUCCAUCACAACCUCCUUGAGUGAGCGAUAGCAGGAUAGAAUAUCCACAAAGCUAAAC

Get precursor sequence

Structure

        10          20         30        40        50        60  
CAAGAAAACUAAGAAUU--          -|  A         CCU  G      GUUAUUUCG 
                   UUGUCUUGCU UUG CUCACUCAA   GG UGUGAU         A
                   GAUAGGACGA AGC GAGUGAGUU   CC ACACUA         U
CAAAUCGAAACACCUAUAA          U^  -         CCU  A      CCUAUGGCU 
    120       110       100         90        80        70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Em	Fe	Ma	Ma

Star sequence

Dmo-Mir-67-v2_5p*

mirBase accession

None

Sequence

0- ACUCACUCAACCUGGGUGUGAU -22

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Mature sequence

Dmo-Mir-67-v2_3p

mirBase accession

MIMAT0008665

Sequence

44- CACAACCUCCUUGAGUGAGCGA -66

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