MirGeneDB ID | Ovu-Mir-67 |
Family name |
MIR-67 (all species) |
Seed |
CACAACC |
Species |
Common octopus (Octopus vulgaris) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Aae-Mir-67-v1
Aae-Mir-67-v2
Asu-Mir-67
Bge-Mir-67
Cbr-Mir-67
Cel-Mir-67
Cgi-Mir-67-P4
Cgi-Mir-67-P5
Cgi-Mir-67-P6
Csc-Mir-67
Cte-Mir-67
Dan-Mir-67-v1
Dan-Mir-67-v2
Dma-Mir-67
Dme-Mir-67-v1
Dme-Mir-67-v2
Dme-Mir-67-v3
Dmo-Mir-67-v1
Dmo-Mir-67-v2
Dpu-Mir-67
Dsi-Mir-67-v1
Dsi-Mir-67-v2
Dsi-Mir-67-v3
Dya-Mir-67-v1
Dya-Mir-67-v2
Dya-Mir-67-v3
Efe-Mir-67-P1
Efe-Mir-67-P2
Efe-Mir-67-P3
Hme-Mir-67-v1
Hme-Mir-67-v2
Isc-Mir-67
Lan-Mir-67
Lgi-Mir-67
Lpo-Mir-67-P7
Lpo-Mir-67-P8
Lpo-Mir-67-P9
Lpo-Mir-67-P10
Lpo-Mir-67-P11
Npo-Mir-67
Obi-Mir-67
Sme-Mir-67
Tca-Mir-67-v1
Tca-Mir-67-v2
Tca-Mir-67-v3
|
Node of Origin (locus) |
Protostomia
|
Node of Origin (family) |
Protostomia
|
Genome context (GCA_003957725.1_ASM395772v1_OVU) |
RXHP01012364.1: 113336-113393 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AACACCCCGUGAACCUGUUGCCCUGCUUGUCCUUGUUCAGUUUGGUCGUGGUGUUCAGAGAAUCAUCACAACCUGCUUGAAUGAGGAGAAGCGGGAAGACGUCACAGCGGAGCCGAGA
Get precursor sequence
|
Structure | 10 20 30 40 50
AACACCCCGUGAACCUGUUGC-- G UG -| UU C UUCA
CCUGCUU UCCU UUC AGU GGU GUGGUG G
GGGCGAA AGGA AAG UCG CCA CACUAC A
AGAGCCGAGGCGACACUGCAGAA G GU U^ U- A UAAG
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
No |
No |
No |
No |
No |
No |
No |
No |
No |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Star sequence |
Ovu-Mir-67_5p* |
mirBase accession | None |
Sequence |
0- CCUUGUUCAGUUUGGUCGUGGUG -23
Get sequence
|
Mature sequence |
Ovu-Mir-67_3p |
mirBase accession | None |
Sequence |
35- UCACAACCUGCUUGAAUGAGGAG -58
Get sequence
|